Pairwise Alignments

Query, 397 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

 Score = 87.4 bits (215), Expect = 6e-22
 Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 48/376 (12%)

Query: 33  PVKQQNLPSIIVAHAAKRDLVDRIIATGTIRPVDEIYVQPLVDGLSIDTLNVDIGDRVEA 92
           P   Q + ++ V  A   D+   + A GT++P   + V     G  I  L+V++GD+V  
Sbjct: 31  PFGAQPVSTVAVTRA---DIESSVTALGTLQPRRYVDVGAQASG-QIRNLHVEVGDQVHK 86

Query: 93  NAILAVLSSDSLILQKSQLEANKAKAQAAVAQAKAQVLEAEASANDANRQRDRAAKLGQS 152
             +L  +   +   Q+++L+A +       AQ   Q  + + +     RQRD AA     
Sbjct: 87  GQLLVEIDPST---QQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAA----- 138

Query: 153 GSGSVSQVEQTQAQAEVAAAKLNAARQAVSAGEADIKVVDAQIADIDLKLTRTGVKTPVA 212
               V    +   Q   A A+LN  +  +   +A I+  +A +   + +L  T +  P+ 
Sbjct: 139 ----VGATREEDLQT--AEAQLNVTQARIDMYQAQIRQANASLRSDEAELGYTRIFAPMD 192

Query: 213 GIVSAKNAKVGAIASGAGNP--LFTVIKDGAIELVADLSETDIQKVKIGQKAYLT-VAGG 269
           G V A +A+ G   +       +  + K   + + A +SE DI K++ G  AY T +AGG
Sbjct: 193 GTVVAVDAREGQTLNAQQQTPLILRIAKLSPMTVWAQVSEADIGKIQPGMTAYFTTLAGG 252

Query: 270 AEKIEGKVRLVSPT----VDPTTRLGS----------------VHVVLPENSPARSGMYA 309
             +    VR V P     +D T++ G                   V+L  ++P  + M  
Sbjct: 253 KRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDVDNPDGALMAE 312

Query: 310 SAA----IIVEETNALALPLSAVT-SGREGSTTRKVEG--DVVKQVKIETGIEDSGFIEI 362
                  ++ + +  L+ PL+A+  S  EG    +V G    V+Q K+ TG+ D   ++I
Sbjct: 313 MTTQVFFVVGQASQVLSAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVRTGLSDRLRVQI 372

Query: 363 VSGLAAGDKVVEKAGA 378
           + GL+ GD++V  A A
Sbjct: 373 LDGLSEGDRLVIGAPA 388