Pairwise Alignments

Query, 330 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) from Agrobacterium fabrum C58

Subject, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 18/261 (6%)

Query: 1   MKMKLASILLAGASVLTAFGAQATDKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDI 60
           ++  LA+ LL     +    A A DK+ L   W  QA+  G+Y A   G YE EGLDV I
Sbjct: 12  LRSLLAAALLPTTLTIAPL-AIAGDKVVLLTSWYAQAEQGGFYQALADGLYEKEGLDVSI 70

Query: 61  KPGGPDIAPAQVLAGGGADVIVDWMPSALATREKGVPLVNIAQPFKSSGMMLTCLKETGI 120
           + GGP +   Q+L    AD IV++    L + E+G+P+V +A PF+     L  +    +
Sbjct: 71  RMGGPQVNGMQLLVSKQADFIVNYDLQILKSVEQGLPVVAVAAPFQGDPQGL--MTHADV 128

Query: 121 TKPEDFKGKTLGVWFFGNE--YPFLSWMAHLKIPTTGGADGVTVLKQGFNVDPLLQKQAA 178
           +  +   GK + V   G +  +P+L     L       A   T   Q F  DP   +QA 
Sbjct: 129 SGLDALGGKPVLVSTSGQQTWWPWLKGKYQL---ADNQARPYTFNLQPFLADPQTTQQAY 185

Query: 179 CISTMTYNEYWQVIDAGIKPEELVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFV 238
             S     E +Q I AG+ P     F +   G       +   +D +  A+  E +  FV
Sbjct: 186 ASS-----ELFQAIKAGVTPN---FFLFADAGYPPYGSTVVTRQDII--AEHPERVAGFV 235

Query: 239 RASMKGWKWAEEHPDDAAGIV 259
           RASM+GWK   + P     ++
Sbjct: 236 RASMEGWKRYLDDPSAGNALI 256