Pairwise Alignments

Query, 291 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 257 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  122 bits (307), Expect = 6e-33
 Identities = 86/282 (30%), Positives = 145/282 (51%), Gaps = 40/282 (14%)

Query: 3   LLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERPVL 62
           LL   + P L +L+ +L+LW LA+    +P        A   P  ++++ Q  A+     
Sbjct: 6   LLSPALRPFLLILM-LLVLWDLAIRLFKIP--------AYLIPPPWEVVKQLVAEW---- 52

Query: 63  PAPHQIAAELWDTTVNKAITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAM 122
             PH + AE W TT+                   ATL GF +  ++GI +A+ I ++R +
Sbjct: 53  --PH-LLAESWKTTL-------------------ATLGGFGLTILIGIPIAMVIAYSRVV 90

Query: 123 DRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGLRS 182
           +  V P ++ SQ+IP +AIAP+ +V        G+ PK + +  L FFP+VV  V G +S
Sbjct: 91  ESYVYPLLVFSQSIPKVAIAPLFVVWFGF----GIFPKVISAFLLGFFPVVVSTVMGFKS 146

Query: 183 PETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVAGL 242
            E   LDL  +  AS  Q F+K+  P ALP +F+ LK+++ +A+VGA+VGE   G+ +G+
Sbjct: 147 VEPDMLDLSRSMGASRLQTFFKISLPQALPQIFSGLKVSVTLAVVGAVVGEF-VGSNSGI 205

Query: 243 GARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVL 284
           G  L   +       ++AAL + + +  +L   + +    ++
Sbjct: 206 GYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLVERVMI 247