Pairwise Alignments

Query, 213 a.a., transcriptional regulator, TetR family from Agrobacterium fabrum C58

Subject, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 3/147 (2%)

Query: 8   KTQKRTRIQEEKQETILEAALSVFSTNGFRGSTIDQIAEAAGMSKPNVLYYFRTKEAMHR 67
           KT  R +  +  ++ IL+AA+ VFS  GF G  I+QI+  A  +   + YYF +KE +  
Sbjct: 5   KTGVRAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFI 64

Query: 68  ALIERVLDTWLDPLRAFDAE-GNPESEIRSYIRRKLEMSRDFPRESRLFANEILQGAPHI 126
           +++E +  ++         +  +PE  +R  +    +     P    + A E L    H 
Sbjct: 65  SVLEHIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHA 124

Query: 127 EDELKGPLKQLVDEKAEVIRAWIKAGR 153
                  L+ L  E   V+R  I+AG+
Sbjct: 125 RKSQN--LRALSGEAVGVLRPIIEAGQ 149