Pairwise Alignments

Query, 256 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score =  150 bits (378), Expect = 3e-41
 Identities = 97/251 (38%), Positives = 139/251 (55%), Gaps = 14/251 (5%)

Query: 7   LLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMK-EKCS 65
           L A  + A SA   +  ++ GI   +YPPF  KDASG   G++ D+ DA+CA+MK EKC 
Sbjct: 9   LAAAVSMAFSATAMAETLKMGI-EAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEKCE 67

Query: 66  IVELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGE---KPG 122
           +    WDG+IPAL  KKFD + SS+S T+ER+  +DFT+ YY+   + I  K     K  
Sbjct: 68  VYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFKTD 127

Query: 123 AAPEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQTLDEAFQDLAAGRIDYVFGDSLV 182
           AA   +KGK IG Q AT+   Y +       + K Y T + A+ DL +GR+D +  D  V
Sbjct: 128 AA--YLKGKVIGAQRATLAGTYLEDKLPD-TEAKLYDTQENAYLDLTSGRLDGILADKYV 184

Query: 183 LDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGKYD 242
              ++KS  G       G+   + + +G+ V    RK D  L+ +LN A+A ++A G Y 
Sbjct: 185 QYEWLKSKDG-SAYEFKGDPVVESDKIGIAV----RKGD-PLRERLNKALAEIKADGTYK 238

Query: 243 EITKKYFSFDI 253
           +I  KYF F I
Sbjct: 239 KINDKYFPFSI 249