Pairwise Alignments

Query, 240 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 229 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  176 bits (446), Expect = 4e-49
 Identities = 93/220 (42%), Positives = 138/220 (62%), Gaps = 1/220 (0%)

Query: 17  GWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTTAIRAVPELI 76
           G+G  +L GA  TL ++  +  + IV+GL G   +LS  R L  L +LY+T IR +P+L+
Sbjct: 4   GYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLV 63

Query: 77  LIVGLYYAGTDGLNRLLQLMGLPP-LEVNGFVAAVAVLGFVQGAYMTEVLRGAILAVPNG 135
           LI+ ++Y G D +NR+  L+G    +++N  +A +  LGF+ GAY++E  RGA L +P G
Sbjct: 64  LILLIFYGGQDIINRVAPLLGYEDYIDLNPLIAGIGTLGFIFGAYLSETFRGAFLGIPKG 123

Query: 136 QIEAARAFGMSPFLRFRRVVLPALLPNALPGLANLWLAVTKDSALVAVVGYQELALATRL 195
           Q EA  A+GMSP   F R+ +P ++  A+PG  N WL +TK +AL++VVG Q++    + 
Sbjct: 124 QAEAGVAYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQ 183

Query: 196 AGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRG 235
           A  +T++ F FFLA A LYL +T VS L    LERR   G
Sbjct: 184 AADATREPFTFFLAVAALYLVLTSVSLLALKYLERRYSVG 223