Pairwise Alignments

Query, 229 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 236 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 3e-32
 Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 10/224 (4%)

Query: 8   KYW-PLLLS------GAWQTLALLVISVSIGFVLAIGLAFAQVSGGRVTKILARAYCTFF 60
           +YW P L S      G   T+ LL  ++ IGF+++I L+ A+VS  R+ +   + Y   F
Sbjct: 7   EYWRPFLYSDGQHITGLAMTMWLLTTALVIGFLVSIPLSIARVSRKRLVRWPVQFYTYLF 66

Query: 61  RGTPLLIQLWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRG 120
           RGTPL IQL + Y G+ S   +     Q  +    R+      ++F LN  AY  E+  G
Sbjct: 67  RGTPLYIQLLICYTGIYSLAAV---REQPLLDAFFRDAMNCTILAFALNTCAYTTEIFAG 123

Query: 121 ALLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTITGEVVMQLKATPLAFTVTVM 180
           A+ ++  GE+EA +A+G+  + L   + +P A+R +LP  + EV++ L +T +AFT T+ 
Sbjct: 124 AIRSMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATIP 183

Query: 181 DLYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLVERQ 224
           D+  VA      T + ++   +  + YL +T  +   F L ER+
Sbjct: 184 DILKVARDANSATFMTFQSFGIAALIYLTVTFALVGLFRLAERR 227