Pairwise Alignments

Query, 229 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 232 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  166 bits (419), Expect = 5e-46
 Identities = 92/223 (41%), Positives = 129/223 (57%), Gaps = 4/223 (1%)

Query: 2   DFSWVAKYWPLLLSGAWQTLALLVISVSIGFVLAIGLAFAQVSGGRVTKILARAYCTFFR 61
           D++ V +  P+   G   TL LL IS+  G + AI L   +VS   V  + A  Y    R
Sbjct: 4   DYNVVWEALPMYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVSRQPVVNLAAWLYTYVIR 63

Query: 62  GTPLLIQLWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGA 121
           GTP+L+QL+L+YYG+  F      +R+S  WP+L    F A ++F +N +AY AE++ G+
Sbjct: 64  GTPMLVQLFLIYYGLAQF----EAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGS 119

Query: 122 LLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTITGEVVMQLKATPLAFTVTVMD 181
           L A P GE+EA +A GM R  + RRI LP A+R ALP  + EV+M L+ T LA  VT++D
Sbjct: 120 LKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLID 179

Query: 182 LYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLVERQ 224
           +   A  V     L +E  I   VFYL LT I+ R F + ER+
Sbjct: 180 ITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERR 222