Pairwise Alignments

Query, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 298 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 23/290 (7%)

Query: 8   PAIFVFLWSTGWVTAKYAVYYTGPLTFLCLRYLLAGLLLWAICRFSGI-SWPKQRADVLR 66
           P + V +WS   V +K A     P      R+LLA LL   +     + +W   R  + R
Sbjct: 7   PLLAVVIWSGNTVVSKMAAGTIAPAEISFYRWLLAALLFTPLALRPVLRNWRAIRPQLGR 66

Query: 67  AILSGVFLHGIYLGMIWWAIGQGVPAAIGGIIAGLQPLMTAVAARFMIGERISPLQRAGL 126
             + G+    +Y  + ++A      A   GII  L P+M    +  ++G+R++    AG 
Sbjct: 67  IAVLGLLGMVVYQSLAYYA-AYLTTATHMGIIGSLTPMMVLALSIVLLGQRLTAGAVAGS 125

Query: 127 LLGFAGIAIAV----LPKVMATGA-LGMSVPLYAVAVNVLGMVSVTYGTLYQKKYVHGGN 181
           L+   G+ + V    L  ++ +GA +G  + L A+    +      Y  L ++  + G  
Sbjct: 126 LVSIMGVLVVVSSGDLGTLLKSGANMGDGLMLLAMLAYAI------YVILLKRWGMKGVP 179

Query: 182 IMAVATLQYVGALLVTVPFALLLEDGHVDWSLGLAATLGWSVGAISIGAVALL----LYL 237
            + +  LQ V A++  +P  LL         +GL+A     +G   +GA  L     ++ 
Sbjct: 180 ALQLLYLQIVFAVIALLPLYLLTP------RMGLSAANLPLIGFAGLGASMLAPLVWMHT 233

Query: 238 IRRGQVSRAASLIYLVPPLAAVEAAVLFGETLTPAMIAGTVLAVTGVYLA 287
           +     SRA+    L+P   A+ AAV+ GE+L      G VL V GV LA
Sbjct: 234 VAHIGPSRASMFFNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGVLLA 283



 Score = 29.6 bits (65), Expect = 9e-05
 Identities = 17/60 (28%), Positives = 29/60 (48%)

Query: 81  MIWWAIGQGVPAAIGGIIAGLQPLMTAVAARFMIGERISPLQRAGLLLGFAGIAIAVLPK 140
           ++W      +  +   +   L PL TA+ A  +IGE ++     G +L  AG+ +A L K
Sbjct: 228 LVWMHTVAHIGPSRASMFFNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGVLLAELWK 287