Pairwise Alignments

Query, 1231 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

Subject, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 1e-61
 Identities = 142/392 (36%), Positives = 213/392 (54%), Gaps = 13/392 (3%)

Query: 660  EMKVREEELQRLLSRAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAKSKLDTRQKTF 719
            E K    EL +    AE A+RAKS+FLA MSHE+RTPMNGVLGM +LL  + L + Q  +
Sbjct: 243  EQKQAIAELIQAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTPLSSEQADY 302

Query: 720  TDIIVKSGNALLTIINDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKDIEL 779
            T +  +S   LL +INDILDFS+IE   ++L  + F+  E + + V     +A ++ + L
Sbjct: 303  TAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSVQSFQHSAQQRGLGL 362

Query: 780  IVRIDASVSG-KVIGDAGRFRQIVTNIVGNAVKFTETGHVLVELSAQSAEASESIFSLRV 838
             +++ A +   +V GD  R RQI+ N++GNA+KFTE G V V+   Q  +      +  V
Sbjct: 363  HLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQVDARWQVLDRQLIWLTCSV 422

Query: 839  EDSGIGIPVDKLETIFDKFSQVDGSATRRHEGTGLGLAITVGLVGLFDGKINVVSEVGRG 898
             D+GIGI  D+LE +F  F Q D S +RR+ GTGLGL+I   L     GK+   S  G G
Sbjct: 423  RDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAERMGGKLRGESREGLG 482

Query: 899  SAFEVDIPFQVMERRRDVPLL------SVAIDDIRVLVIDDNDVNRRILTEQLRSWGIDG 952
            S F +++P   +     VPL       +   D+ +VL+++DN VNR ++   LRS G+  
Sbjct: 483  STFTLEMPL-ALANPAPVPLTPPTTVRTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGL-- 539

Query: 953  HAVENGPSGIAVLQEAASLGFAIDAIILDYHMPVMNGLDVVERIRADKRFDDIAIVFLTS 1012
             AV     G+  ++      FA  A+++D  +P ++G +   RIR       + I+ LT+
Sbjct: 540  -AVCTAEDGLEAVELVGRQRFA--AVLMDCRLPHLDGYEATRRIRQLPNGAGLPIIALTA 596

Query: 1013 MDVVGDETLFTDLSVQAHLMKPARARLLRSTL 1044
              + GD        +  +L KP R   L+  L
Sbjct: 597  NALQGDRERCMAAGMDDYLSKPLRRTELQQVL 628



 Score = 97.4 bits (241), Expect = 3e-24
 Identities = 64/173 (36%), Positives = 89/173 (51%), Gaps = 19/173 (10%)

Query: 1061 LAQGTGGEKARPESR-----------PAEKKQRAEAPATVPERSRPCLLD---VLVAEDN 1106
            LA+  GG K R ESR           P      A  P T P   R  + D   VL+ EDN
Sbjct: 465  LAERMGG-KLRGESREGLGSTFTLEMPLALANPAPVPLTPPTTVRTTVPDNDQVLLVEDN 523

Query: 1107 DVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPALILMDVSMPVMNGHQATQAIRAA 1166
             VN+ V   +L+  GL      +G  AV+       A +LMD  +P ++G++AT+ IR  
Sbjct: 524  PVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEATRRIRQL 583

Query: 1167 EQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKPISPESLEDKIAQWL 1219
               AG    +P+I +TA+  + DRERC+ AGMDDYLSKP+    L+  + +WL
Sbjct: 584  PNGAG----LPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQRWL 632