Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 413 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

 Score =  165 bits (418), Expect = 2e-45
 Identities = 102/288 (35%), Positives = 165/288 (57%), Gaps = 14/288 (4%)

Query: 30  PAQAGYAHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHAGRLRWDQKITMS 89
           PA    A  +MD ++G+VLA+ N D    PASLTKMMT ++  +AL +G+L+ D  +++S
Sbjct: 62  PALPAKAWLLMDFDSGEVLASANPDEPLPPASLTKMMTSFLVEQALRSGKLKKDDLVSVS 121

Query: 90  KNG---ASVIPSKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLGGSEARFAEMMTR 146
           +N     S   S +Y+      TV + + G+IV+S ND ++ + +H+ G+E  FA++M  
Sbjct: 122 QNAWCRGSSTESCMYLPLNSQATVIDILRGIIVQSGNDASKAIAEHMAGTEEGFAKLMNA 181

Query: 147 KARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLFAMESFSFRGKRI 206
           +A++LGM+ T F N++GLP     ++ARD+A L  A+ RD  + Y ++A   F + G + 
Sbjct: 182 EAQRLGMTHTHFVNSTGLPDPDHKSSARDLAILARAIIRDSSEYYPIYAEREFKYNGIKQ 241

Query: 207 RGHNNLMYRYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGGKTARSRDAQMAALL 266
              N L+Y    +DG+KTG+T  +GF LV++   NG R++ V+L   +A++R  +  ALL
Sbjct: 242 GNRNALLYTDPTVDGLKTGHTQEAGFCLVTSSKRNGMRLITVILNTNSAQARADETRALL 301

Query: 267 -------DKAVPQASRSRNTEQLVASANVSRTFDVAAAL-PPASVPLP 306
                  +KA P  S   NT     +    +   VAA L  P +V +P
Sbjct: 302 GWGYGNFEKATPIQS---NTVVTTTNVRFGKADTVAAGLGAPWTVTVP 346