Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 392 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  159 bits (403), Expect = 1e-43
 Identities = 87/259 (33%), Positives = 143/259 (55%), Gaps = 13/259 (5%)

Query: 22  AILSLQASPAQAGYAHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHAGRLR 81
           A+  + A P  A  A+ ++DA +G+VLA+++ D    PASLTK+MT Y+ F+AL AG++ 
Sbjct: 21  ALAQMPAPPEVAARAYLLLDATSGQVLASKDPDQAVEPASLTKLMTAYLVFDALKAGKIS 80

Query: 82  WDQKITMSKNGASVIPSKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLGGSEARFA 141
             Q   +S+    +  S++++       V + + GMIV+S ND    + + + GS  RF 
Sbjct: 81  LTQTFGVSERAWKMPGSRMFIDPKMQVPVEDLIKGMIVQSGNDATVALAEGVAGSVERFV 140

Query: 142 EMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLFAMESFSF 201
           ++M  +A+ LGM+ T +RN  GL      TTARD+A L   L  DFPK    ++++ + +
Sbjct: 141 QLMNEQAKALGMTSTSYRNVEGLTEAGHTTTARDLATLASRLMTDFPKYVPYYSIQRYRY 200

Query: 202 RGKRIRGHNN---LMYRYQGMDGIKTGYTNASGFNLVSAIN----------HNGRRVVGV 248
            G       N   L++R   +DG+KTG+TNA+G+ LV+                RR++ V
Sbjct: 201 PGTPAANDTNRNLLLFRDPSVDGLKTGHTNAAGYCLVATARRQVPGLGEGAQGQRRLISV 260

Query: 249 VLGGKTARSRDAQMAALLD 267
           +LG  +  +R A+   LL+
Sbjct: 261 LLGASSENARAAESQKLLN 279