Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 403 a.a., D-alanyl-D-alanine carboxypeptidase DacA from Erwinia tracheiphila SCR3

 Score =  159 bits (402), Expect = 1e-43
 Identities = 85/238 (35%), Positives = 141/238 (59%), Gaps = 7/238 (2%)

Query: 36  AHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHAGRLRWDQKITMSKNG-AS 94
           A+ ++D N+GKVLA +NAD    PASLTKMMT Y+  +A+ AG++  +  +T+ K+  A+
Sbjct: 48  AYVLIDYNSGKVLAEKNADARRDPASLTKMMTSYVIGQAVKAGKIHQEDMVTVGKDAWAT 107

Query: 95  VIP-----SKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLGGSEARFAEMMTRKAR 149
             P     S ++++ G   +V +   G++++S ND    M D++ GS+  F  +M    +
Sbjct: 108 GNPVFKGSSLMFLKPGDRVSVSQLTRGIVLQSGNDACVAMADYVAGSQDAFVGLMNNYVK 167

Query: 150 QLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLFAMESFSFRGKRIRGH 209
            +G+  T F+   GL +  Q ++ARDMA +G AL RD P EY ++  + F+F   R    
Sbjct: 168 AIGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPDEYAVYKEKEFTFNNIRQLNR 227

Query: 210 NNLMYRYQ-GMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGGKTARSRDAQMAALL 266
           N L++     +DGIKTG+T+A+G+NLV++      R++  V+GG T + R+ +   LL
Sbjct: 228 NGLLWDTSLQVDGIKTGHTDAAGYNLVASATEGQMRLISAVMGGHTYKGRETESKKLL 285