Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 400 a.a., D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a from Escherichia coli BL21

 Score =  156 bits (394), Expect = 1e-42
 Identities = 97/266 (36%), Positives = 149/266 (56%), Gaps = 8/266 (3%)

Query: 8   GMAGAWVFALTFFCAILSLQASPAQAGYAHFIMDANTGKVLAARNADVLNHPASLTKMMT 67
           G A  ++FA T F A  +++A P+    A  +MD  +GKVLA  NAD    PASLTK+MT
Sbjct: 14  GSAFLFLFAPTAFAAEQTVEA-PSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMT 72

Query: 68  LYMTFEALHAGRLRWDQKITMSK------NGASVIPSKLYVRQGQTFTVREAVYGMIVKS 121
            Y+  +AL A +++    +T+ K      N A    S ++++ G   +V +   G+I++S
Sbjct: 73  SYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQS 132

Query: 122 ANDMAEGMGDHLGGSEARFAEMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGL 181
            ND    + D++ GS+  F  +M   A++LG++ T F+   GL +  Q +TARDMA LG 
Sbjct: 133 GNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGK 192

Query: 182 ALQRDFPKEYGLFAMESFSFRGKRIRGHNNLMYRYQ-GMDGIKTGYTNASGFNLVSAINH 240
           AL  D P+EY +   + F+F   R    N L++     +DG+KTG T  +G+NLV++   
Sbjct: 193 ALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQ 252

Query: 241 NGRRVVGVVLGGKTARSRDAQMAALL 266
              R++ VVLG KT R R  +   LL
Sbjct: 253 GDMRLISVVLGAKTDRIRFNESEKLL 278