Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 403 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) from Escherichia coli BL21

 Score =  156 bits (395), Expect = 1e-42
 Identities = 86/238 (36%), Positives = 138/238 (57%), Gaps = 7/238 (2%)

Query: 36  AHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHAGRLRWDQKITMSKNG-AS 94
           ++ ++D N+GKVLA +NADV   PASLTKMMT Y+  +A+ AG+ +    +T+  +  A+
Sbjct: 48  SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWAT 107

Query: 95  VIP-----SKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLGGSEARFAEMMTRKAR 149
             P     S ++++ G    V + + G+ ++S ND    M D   GS+  F  +M     
Sbjct: 108 GNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVN 167

Query: 150 QLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLFAMESFSFRGKRIRGH 209
            LG+  T F+   GL +  Q ++ARDMA +G AL RD P EY ++  + F+F G R    
Sbjct: 168 ALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNR 227

Query: 210 NNLMY-RYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGGKTARSRDAQMAALL 266
           N L++     +DGIKTG+T+ +G+NLV++      R++  V+GG+T + R+A+   LL
Sbjct: 228 NGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLL 285