Pairwise Alignments

Query, 317 a.a., ABC transporter, substrate binding protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 299 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 82/291 (28%), Positives = 131/291 (45%), Gaps = 22/291 (7%)

Query: 9   LALAAAISSMTFSAAVAAEPASCGTVRFSDVGWTDITATTATATVLLKSLGYETDVKLLS 68
           LAL A   S   + A    P   G V +SD   T+IT   A+ T L + L     + +  
Sbjct: 18  LALGA---SAAVTQAEEKPPVRIGWVNWSD---TEITVKLAS-TALQEHLKQSVKLVMAD 70

Query: 69  VPVTYTSLKNKDIDVFLGNWMP-TMEGDIAPYRDD-KSVETLRENLTGAKYTLATNAKGA 126
           + + + +L N +ID+    W+P T +     Y+D  + +  L E   G    + T+   A
Sbjct: 71  IGIQFQALANGNIDLIPMVWLPSTHKAFYDKYKDRLEDLGVLYEGRIGM--AVPTSVPVA 128

Query: 127 ELGIKDFKDIAAHSSELGGKIYGIEPGNDGNRLILDMVAKDSFGLKSFEVVESSEQGMLS 186
           E+   +  +      +  GKI   E GN   +  L + A + + L  +++V SSE GML+
Sbjct: 129 EVASVEDLNKPGIREKFDGKILTSEVGN--GQYTLTVKAIEDYKLTGYKLVGSSESGMLN 186

Query: 187 QVARAEKSGEPIVFLGWEPHPMNANFKLTYLTGGDEVFGPNFGGATIYTNVRKGYVEECP 246
           ++ R  K  +  +   W PH M + + L YL    ++FG   G   I+   RKG+ +E P
Sbjct: 187 EMDRNLKRDKWSLVNAWSPHWMFSKWSLRYLEDPKQIFG---GAEQIHAMARKGFSQEHP 243

Query: 247 NVGAFLKNLQFSLPMENEIMGKILNDGLEGEA--AATAWLKANPAAIEPWF 295
            V  F  +  FSLP  +  +  ++    E  A  A  A+  AN A  E  F
Sbjct: 244 EVAYFFAH--FSLPQAD--LEALMMQARESTADKAVAAYYAANKARFEGMF 290