Pairwise Alignments

Query, 317 a.a., ABC transporter, substrate binding protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

 Score =  357 bits (915), Expect = e-103
 Identities = 185/313 (59%), Positives = 221/313 (70%), Gaps = 6/313 (1%)

Query: 6   SRCLALAAAISSMTFSAAVAAEPASCGTVRFSDVGWTDITATTATATVLLKSLGYETDVK 65
           S  L L A +S+     A AAEP  C TVRFSDVGWTDIT TTAT +V+L++LGY+T   
Sbjct: 4   SPSLLLVALLSAPLL--AQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTT 61

Query: 66  LLSVPVTYTSLKN-KDIDVFLGNWMPTMEGDIAPYRDDKSVETLRENLTGAKYTLATNAK 124
           ++SVPVTY SL   KD+DVFLGNWMPTME DI  YRD  +VET+R NL  AKYTLA    
Sbjct: 62  MISVPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPQA 121

Query: 125 GAELGIKDFKDIAAHSSELGGKIYGIEPGNDGNRLILDMVAKDSFGLKS--FEVVESSEQ 182
             + G+KDF DI     EL GKIYGIEPGNDGNR I  M+ K++FGLK   F++V+SSE 
Sbjct: 122 LYDKGLKDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEA 181

Query: 183 GMLSQVARAEKSGEPIVFLGWEPHPMNANFKLTYLTGGDEVFGPNFGGATIYTNVRKGYV 242
           GMLSQV RA+K GE +VFLGWEPHPMN  FK+ YLTGGD+ FGP+FG AT+ TN RKGY 
Sbjct: 182 GMLSQVDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYT 241

Query: 243 EECPNVGAFLKNLQFSLPMENEIMGKILNDGLEGEAAATAWLKANPAAIEPWFANVKTKD 302
           +EC NVG  LKNL F L  E+ +MG +L+D ++ EAAA  W+K NP  ++ W A V T D
Sbjct: 242 QECSNVGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTVD 301

Query: 303 GSADALPAVKKAL 315
           G    L AVK  L
Sbjct: 302 GK-PGLEAVKAKL 313