Pairwise Alignments

Query, 317 a.a., ABC transporter, substrate binding protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  311 bits (797), Expect = 1e-89
 Identities = 158/310 (50%), Positives = 203/310 (65%), Gaps = 3/310 (0%)

Query: 9   LALAAAISSMTFSAAV-AAEPASCGTVRFSDVGWTDITATTATATVLLKSLGYETDVKLL 67
           +A    +S   FS  + AA+ A+C T+R SD GWTDITAT   A+VLL +LGYE DVK L
Sbjct: 10  IAAGLILSVAAFSTPLQAADDAACRTIRLSDPGWTDITATNGVASVLLDALGYEADVKTL 69

Query: 68  SVPVTYTSLKNKDIDVFLGNWMPTMEGDIAPYRDDKSVETLRENLTGAKYTLATNAKGAE 127
           SVP+ Y ++KN +IDVFLGNWMP  +  +      K+ E + +NL GAK+TLA  A  AE
Sbjct: 70  SVPIGYQAMKNGEIDVFLGNWMPAQKSFVDDLNAAKAAEVMTKNLEGAKFTLAVPAYMAE 129

Query: 128 LGIKDFKDIAAHSSELGGKIYGIEPGNDGNRLILDMVAKDSFGLKSFEVVESSEQGMLSQ 187
            G+KDF D+A H+ E   KIYGIEPG   N+ I  ++  + FGLK +++VES EQ ML+Q
Sbjct: 130 KGVKDFADLAKHADEFESKIYGIEPGAPANQNIQKIIDANDFGLKGWQLVESGEQAMLAQ 189

Query: 188 VARAEKSGEPIVFLGWEPHPMNANFKLTYLTGGDEVFGPNFGGATIYTNVRKGYVEECPN 247
           V RA +  + +VFL W PHPMN    + YL+GGD  FGPNFGGA +YT  R G+ ++CPN
Sbjct: 190 VERAGRDKKAVVFLAWAPHPMNEKIDIAYLSGGDAYFGPNFGGAEVYTLARTGWPQQCPN 249

Query: 248 VGAFLKNLQFSLPMENEIMGKILNDGLEGEAAATAWLKANPAAIEPWFANVKTKDGSADA 307
                KNL+F + MEN +MG IL  G + +AAA AWLKANP A++ W   V T DG   A
Sbjct: 250 AATLFKNLKFDIGMENSLMGSILG-GEDSKAAAAAWLKANPKALDGWLQGVTTLDGKPGA 308

Query: 308 LPAVKKALGL 317
             AVK  LGL
Sbjct: 309 -DAVKGKLGL 317