Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  199 bits (506), Expect = 7e-56
 Identities = 113/265 (42%), Positives = 168/265 (63%), Gaps = 9/265 (3%)

Query: 82  DWLTGNLAFFFDWLSFIFQSVINALLY-------VLQAPHPLIIVAIVTALSAWTRRSAG 134
           DW+ G +         +F+ + + LL+       +L+A    +++AIV  + AW      
Sbjct: 12  DWVNGWVDSLVTNYGDVFRHISDTLLWAIVNLEGLLRAAPWWLMLAIVGGV-AWHATRKV 70

Query: 135 MPIFTALGLLLIIN-LGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAGMRPA 193
           +     +GLL ++  +G W    +TLAL++ A+ + ++IG+PLGIL+AR   + + + P 
Sbjct: 71  VTTAVIVGLLFLVGAVGLWDKLMQTLALMMVATVISVLIGVPLGILSARSNRLRSVLMPL 130

Query: 194 LDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVA 253
           LD+MQT+P+FVYLIP L+LFGLG VP + ATVI+A P  +RLT LGI      ++EA  A
Sbjct: 131 LDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINA 190

Query: 254 FGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALNTVNI 313
           FGA   Q L  V+LP A P IMAG+ QT M++LSMVVI++++GA GLG  V+  + T+N+
Sbjct: 191 FGANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNV 250

Query: 314 AMGFEAGLCIVILAIVLDRLFRLPG 338
             G EAGL IVILA+V+DR+ +  G
Sbjct: 251 GRGLEAGLAIVILAVVIDRITQAYG 275