Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 3e-54
 Identities = 121/286 (42%), Positives = 167/286 (58%), Gaps = 3/286 (1%)

Query: 51  ALIHERSFLTVEWLSAPENRLPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVL 110
           AL  E +   V++ S  ++ L         I W        F  +    ++VIN +   L
Sbjct: 403 ALTPEAAGTLVQFPSDRDSMLAAAGAIDALIGWSQVTFESAFVGVIVAVRTVINGVEGAL 462

Query: 111 Q-APHPLIIVAIVTALSAWTRRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVC 169
              P P+  +A+V    AW    A + + TAL L  I   G+W+ T  T+ALV A+  + 
Sbjct: 463 GWIPWPVPALALVYL--AWRSAGAILALTTALALGYIGLFGFWERTISTIALVGASVLLS 520

Query: 170 MIIGIPLGILAARRKWIYAGMRPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAI 229
           ++IGIP GIL A+R      + P LD+MQT+PTFVYLIPA+  F +G  P +IATVIFA+
Sbjct: 521 LLIGIPTGILLAKRALARRLVTPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFAL 580

Query: 230 PAPVRLTRLGIVSTPPALVEAAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMV 289
              +RLT LGI   P A VEAAVA GATP Q L +VELP A+  ++ G+ QTI++SLSMV
Sbjct: 581 APMIRLTALGIQEVPKAAVEAAVAHGATPWQTLTRVELPLASGSLLLGVNQTIVMSLSMV 640

Query: 290 VISALVGANGLGVPVVRALNTVNIAMGFEAGLCIVILAIVLDRLFR 335
           V++AL+GA GLG  V+ AL  +    G  AG+ IV  A+V DR+ +
Sbjct: 641 VVAALIGAGGLGYDVMTALRNIKGGEGVLAGIAIVFCALVPDRIIQ 686