Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 354 a.a., glycine betaine/L-proline ABC transporter permease ProW from Escherichia coli ECRC99

 Score =  214 bits (544), Expect = 3e-60
 Identities = 115/270 (42%), Positives = 166/270 (61%), Gaps = 1/270 (0%)

Query: 71  LPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPHPLIIVAIVTALSAWTR 130
           +P+  +  E IDW+  +    F  +      ++N    +L    P  +  IV AL AW  
Sbjct: 62  IPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGM-PAPVAIIVFALIAWQI 120

Query: 131 RSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAGM 190
              GM + T + L+ I  +G W     TLALV+ A   C++IG+PLGI  AR       +
Sbjct: 121 SGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKII 180

Query: 191 RPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEA 250
           RP LD MQT P FVYL+P ++LFG+G VPG++ T+IFA+P  +RLT LGI   P  L+EA
Sbjct: 181 RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA 240

Query: 251 AVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALNT 310
           + +FGA+P Q+L KV+LP A P IMAG+ QT+ML+LSMVVI++++   GLG  V+R +  
Sbjct: 241 SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR 300

Query: 311 VNIAMGFEAGLCIVILAIVLDRLFRLPGTE 340
           +++ +    G+ IVILAI+LDRL +  G +
Sbjct: 301 LDMGLATVGGVGIVILAIILDRLTQAVGRD 330