Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 295 a.a., glycine betaine ABC transporter permease from Agrobacterium fabrum C58

 Score =  186 bits (471), Expect = 8e-52
 Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 3/231 (1%)

Query: 109 VLQAPHPLIIVAIVTALSAWTRRSAGMPIFTALGLLLIIN-LGYWKATTETLALVIAASA 167
           ++ AP P++I+ IV AL+ +  RSA + +    G+L  I   G W+ T +T++++   + 
Sbjct: 55  LIGAPWPVVIL-IVGALAWFASRSATI-VSLCCGILFAIGWFGMWEDTMKTVSMIFVCAV 112

Query: 168 VCMIIGIPLGILAARRKWIYAGMRPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIF 227
           + ++IG+P+GI  AR   +   + P LD+MQT+P+FVYLIP ++L G+G VPG+IA +I+
Sbjct: 113 MSIVIGLPIGIAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVVMLLGIGRVPGVIAVIIY 172

Query: 228 AIPAPVRLTRLGIVSTPPALVEAAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLS 287
           AIP  +RLT LGI      ++EAA AFG++  Q L KV+LP A P IMAG+ QTIM++L+
Sbjct: 173 AIPPMIRLTNLGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALA 232

Query: 288 MVVISALVGANGLGVPVVRALNTVNIAMGFEAGLCIVILAIVLDRLFRLPG 338
           MVVI++++G  GLG PV++A+      +G   GL IV +AI+ DR+ +  G
Sbjct: 233 MVVIASMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRISQAYG 283