Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 282 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  203 bits (516), Expect = 5e-57
 Identities = 103/258 (39%), Positives = 158/258 (61%), Gaps = 1/258 (0%)

Query: 76  YAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPHPLIIVAIVTALSAWTRRSAGM 135
           + ++A+ W+  N    FD++S + +   + +L++LQ   P +++A++ AL  W   +   
Sbjct: 13  WTEDALGWIGDNGEGLFDFVSRLLEGSYDGILWLLQLAPP-VVIALIAALLGWRLINLAA 71

Query: 136 PIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAGMRPALD 195
            I   + LL    +G W  T  TLALV  A+ + +++GIPLGI+A   K +   + P LD
Sbjct: 72  GILAGVALLFCATMGLWAETMSTLALVTTATILALLVGIPLGIIAGFTKSLDRVLEPILD 131

Query: 196 LMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVAFG 255
           L+QT+P ++YL+PA+ L G G    LIAT I A+P  +RLT LGI  TP   +E   A G
Sbjct: 132 LIQTMPPYIYLLPAIALLGYGPATALIATFIVAMPPAIRLTSLGIRMTPREFIELGHASG 191

Query: 256 ATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALNTVNIAM 315
            TP Q+  K+ LPFA P +MAG+ Q++M++  MVVI+ +VG+ GLG  +  A+ T++IA 
Sbjct: 192 LTPWQMFMKIRLPFAIPSVMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGAVRTLDIAT 251

Query: 316 GFEAGLCIVILAIVLDRL 333
              A + IVIL +VLDRL
Sbjct: 252 SINAAIAIVILTMVLDRL 269