Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 285 a.a., proline/glycine betaine ABC transporter permease from Agrobacterium fabrum C58

 Score =  217 bits (553), Expect = 3e-61
 Identities = 118/258 (45%), Positives = 171/258 (66%), Gaps = 6/258 (2%)

Query: 79  EAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPH--PLIIVAIVTALSAW-TRRSAGM 135
           E +  L  N  + F  +S   Q+++ A+L+V  A    P   + +V  + AW   +   +
Sbjct: 16  EIVRSLVVNYGYVFKAIS---QTILQAILFVEWALRGLPWWAIFLVFLVLAWFAAKKISL 72

Query: 136 PIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAGMRPALD 195
            I  A+ L ++  LG W  T +TLAL++ AS + ++IG+P+GIL A+ +W      P LD
Sbjct: 73  VIMVAVMLFIVGALGLWDLTMQTLALMLIASLISIVIGVPIGILLAKSEWARRITLPILD 132

Query: 196 LMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVAFG 255
           +MQT+P+FVYLIPA++LFGLG VP ++AT+++A P  +RLT LGI      +VEAA AFG
Sbjct: 133 VMQTMPSFVYLIPAIMLFGLGKVPAVLATIVYAAPPLIRLTDLGIRQVDREVVEAATAFG 192

Query: 256 ATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALNTVNIAM 315
            +P Q+L  VELP A P IMAGL QTIM++LSMVV+++++GA GLG  V+  + T+++  
Sbjct: 193 GSPRQILFGVELPLATPTIMAGLNQTIMMALSMVVVASMIGARGLGEQVLNGIQTLDVGK 252

Query: 316 GFEAGLCIVILAIVLDRL 333
           G EAGL IVILAIVLDR+
Sbjct: 253 GLEAGLGIVILAIVLDRI 270