Pairwise Alignments

Query, 348 a.a., ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 392 a.a., Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  309 bits (792), Expect = 7e-89
 Identities = 155/281 (55%), Positives = 208/281 (74%)

Query: 5   IIFGNVDIVFGDRPDAALALIDKGSTRDEINAQTGLVLGVANASLSVSEGEILVLMGLSG 64
           I F +VD++F ++P  ALAL+D+G TR++I  QTGLV+GV  A+L +++GEI VLMGLSG
Sbjct: 4   IRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMGLSG 63

Query: 65  SGKSTLVRAVNGLAPVVRGSVSVKTKSGYVDPYRCPAKALRDLRMHTVSMVFQQFGLLPW 124
           SGKS+L+R +NGL  V RG + V+ +  ++D   C A  L+ +R   ++MVFQ+F L+PW
Sbjct: 64  SGKSSLLRCINGLNTVSRGKLFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFALMPW 123

Query: 125 RNVADNVGFGLELSGVPEAERKRMVAEQLELVNLSAWADRKVGELSGGMQQRVGLARAFA 184
             V +N+ FGLE+ G PE ER+++V E+LELV L+ W ++K  ELSGGMQQRVGLARA A
Sbjct: 124 LTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLARALA 183

Query: 185 TGAPILLMDEPFSALDPLIRSRLQDELLEFQSRLKKTILFVSHDLDEAFRIGNRIAMMEG 244
             A ILLMDEPFSALDPLIR  LQDELL  Q++L KTI+FVSHDLDEA ++G RIA+M+ 
Sbjct: 184 MDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAIMKD 243

Query: 245 GHIIQCGTPQQIVRQPATPYVADFVQNMNPISMLTAADVMK 285
           G IIQ   P++IV  PA  YV  FV + NP+++L    +M+
Sbjct: 244 GRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCGRSLMR 284