Pairwise Alignments

Query, 348 a.a., ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 363 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  250 bits (639), Expect = 3e-71
 Identities = 150/341 (43%), Positives = 208/341 (60%), Gaps = 12/341 (3%)

Query: 9   NVDIVFGDRPDAALALIDKGS-TRDEINAQTGLVLGVANASLSVSEGEILVLMGLSGSGK 67
           NV  +FG R   A+  + +G  ++ ++      V+GV +ASL V  GEI  +MGLSGSGK
Sbjct: 17  NVWKIFGARASTAVKAVARGGLSKKQVLEDFDCVVGVCDASLQVHRGEIFCIMGLSGSGK 76

Query: 68  STLVRAVNGLAPVVRGSVSVKTKSGYVDPYRCPAKALRDLRMHTVSMVFQQFGLLPWRNV 127
           STL+R +N L     G ++VK K    D  R  A  LR+LR   ++MVFQ   LLP+R V
Sbjct: 77  STLIRLLNRLIEPSLGKITVKGK----DIARLNAAELRELRARNIAMVFQSVALLPYRTV 132

Query: 128 ADNVGFGLELSGVPEAERKRMVAEQLELVNLSAWADRKVGELSGGMQQRVGLARAFATGA 187
            +N GF LE+ GV + ER R+    LE V L+ W  R   ELSGGMQQRVGLARA A   
Sbjct: 133 LENAGFSLEVRGVAKDERNRIARAALEKVGLADWTSRYPHELSGGMQQRVGLARALAADP 192

Query: 188 PILLMDEPFSALDPLIRSRLQDELLEFQSRLKKTILFVSHDLDEAFRIGNRIAMMEGGHI 247
            I+LMDEPFSALDPLIR +LQDE  +    L K+ +F++HDL+EA RIG+RIA+M+ G I
Sbjct: 193 EIILMDEPFSALDPLIRRQLQDEFRQLTKSLGKSAVFITHDLEEAIRIGDRIAIMKDGVI 252

Query: 248 IQCGTPQQIVRQPATPYVADFVQNMNPISMLTAADVMKRGVDERSGRLTV-AATALPSSP 306
           +Q GT ++IV +PA  YV+DFV  ++ I ++ A  VM+   +  + +      T L +SP
Sbjct: 253 VQVGTAEEIVTKPADDYVSDFVAGISRIHLVKAHTVMQPVAEFAASQPQCDIGTLLRASP 312

Query: 307 LIDI-----LDALSKHAGAIGVVDNGAIIGTISADEVVAGL 342
             DI     L   S H  A+ VV+   +IG ++  +++ G+
Sbjct: 313 RDDIGALIDLTMQSDH-DAVAVVEKDLVIGIVTTRDLLRGV 352