Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 366 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  325 bits (834), Expect = 9e-94
 Identities = 163/358 (45%), Positives = 228/358 (63%), Gaps = 2/358 (0%)

Query: 6   LTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGILGEQ 65
           +T +TLAA+   A  A A+I IG+  PL+G  AA+G+Q K GA  AV +IN KGG+LG++
Sbjct: 6   ITGITLAAALLMAGAARADITIGVAGPLSGSEAAFGEQFKRGAMKAVEDINAKGGVLGQK 65

Query: 66  VVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTPTATA 125
           + L L DD  +PKQ V+ AN++ A+ + FV G   SG +IPAS+V+AE G+L ++P +T 
Sbjct: 66  LALTLGDDACDPKQAVAVANEMAAKKVPFVAGHFCSGSSIPASEVYAETGILQISPASTN 125

Query: 126 PGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSFKATLN 185
           P  T RGL N+FRTCGRDDQQ  +AA Y+  + K K +AI+HDK AYGKGLAD  +  L 
Sbjct: 126 PKFTERGLPNIFRTCGRDDQQGVIAADYIAKHQKDKVVAIVHDKSAYGKGLADQTRDALG 185

Query: 186 AGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGSKAAVI 245
             G+   LY+A++ GEKD  AL  +LK+   D++YFGGY  EAGL+VRQL+D G +  ++
Sbjct: 186 KAGIKAALYEAISAGEKDYSALVTKLKASKVDLLYFGGYKTEAGLIVRQLRDQGMQTRLM 245

Query: 246 GGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLNAYAAV 305
           GGD L   E+W I   AGEGT+ T + D  KN  +    +  +A     EA+TL  Y  +
Sbjct: 246 GGDALVTEEYWAITGAAGEGTMMTFSPDPRKNPANADLVKYYRAQKYEPEAYTLYTYGTI 305

Query: 306 EVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQDGK 363
           +      EKA    D + VA VLK+ E F TAIGK+ +   GD+ +  + ++ W+ GK
Sbjct: 306 QAWAQAAEKA-KTTDWKKVAAVLKA-EKFDTAIGKIGFDAKGDVAAPGYVMYVWKGGK 361