Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 367 a.a., branched-chain amino acid ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score =  266 bits (680), Expect = 7e-76
 Identities = 143/360 (39%), Positives = 216/360 (60%), Gaps = 6/360 (1%)

Query: 1   MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGG 60
           +K K L +  +A +F+   LA  +I + ++  ++GPVA YGDQ   GA+ AV++IN KGG
Sbjct: 3   IKGKALLAGCIALAFSNMALAE-DIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGG 61

Query: 61  ILGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVT 120
           I G ++ +   DD  +PKQ V+ AN++V +GI +V+G + S    PASD++ + G+LM+T
Sbjct: 62  IKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMIT 121

Query: 121 PTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSF 180
           P ATAP LT R    + RT G D  Q   AAKY+L  +K ++IAI+HDK  YG+GLA + 
Sbjct: 122 PAATAPELTARSYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAV 181

Query: 181 KATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS 240
           +  L  G    V +D +T GEKD   L ARLK +N D VY+GGYHPE G ++RQ +  G 
Sbjct: 182 QDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGL 241

Query: 241 KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKA-ANIPAEAFTL 299
           K   +G +G++N    NI  ++ EG + T   +  +   +K   +A+KA    P+ AF  
Sbjct: 242 KTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVW 301

Query: 300 NAYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKW 359
             YAA++ L+AG+ +   + D   +AK LK+  +  T +G +T+ + GDL    F +F W
Sbjct: 302 TTYAALQSLQAGLNQ---SDDPAEIAKYLKA-NSVDTVMGPLTWDEKGDLKGFEFGVFDW 357