Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 123 a.a., RNA polymerase subunit sigma24 from Pseudomonas simiae WCS417

 Score = 42.0 bits (97), Expect = 4e-09
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 1   MLRSLDGDEASYRHLLHALRRLLVAYYGRRMADAARA---DVEDLVQETLLSLHAKRETY 57
           M + L+GD  + R L   +  LLVA+Y    A A R    +VE L +E  L++      Y
Sbjct: 25  MAQVLNGDPGAVRRLAGDVTPLLVAFY-EGQAQAGRIHHENVECLAREAFLAVLQYAADY 83

Query: 58  DRARPFTAWFFSIARYKLI 76
           + A PF AW   IAR  L+
Sbjct: 84  NAATPFRAWLLHIARTTLL 102