Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Paraburkholderia sabiae LMG 24235

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 18/179 (10%)

Query: 3   RSLDGDEASYRHLLHALRRLLVAYYGRRMADAARADVEDLVQETLLSLHAKRETYDRARP 62
           R  +GD+A++  L+    R ++    R + D A  +VED+ Q+  +  +     +     
Sbjct: 13  RVQNGDKAAFELLVSKYHRKIIRLISRLVRDPA--EVEDVAQDAFIKAYRALPQFRGESA 70

Query: 63  FTAWFFSIARYKLIDHYRGRGRRMFSEVELDETLEAESSVDAVTAR-------------- 108
           F  W + IA     ++   +GRR  +  E D   EAE+  DA   R              
Sbjct: 71  FYTWLYRIAVNTAKNYLATQGRRAPTSTEADAE-EAETFSDADQLRDINTPESMLMSKQI 129

Query: 109 -MDVERLLNELPERQRDLIRRVKLEGQSIAEAAEKSGQTELAARVGIHRTLKVLAAKLR 166
              V   +  LPE  R  I   ++EG S  E AE  G      R  I R  + +AAKLR
Sbjct: 130 AETVNAAMAVLPEELRTAITLREIEGLSYEEIAEMMGCPIGTVRSRIFRAREAIAAKLR 188