Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 186 a.a., sigma-70 family RNA polymerase sigma factor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  144 bits (364), Expect = 6e-40
 Identities = 80/164 (48%), Positives = 109/164 (66%), Gaps = 1/164 (0%)

Query: 1   MLRSLDGDEASYRHLLHALRRLLVAYYGRRMADAARADVEDLVQETLLSLHAKRETYDRA 60
           ML  LDGD  ++R LL  L   L  ++ RR+ +   +D EDLVQETL+++HAKR T+DR 
Sbjct: 12  MLNGLDGDAQAWRVLLSDLAAHLRPFFKRRLFNG-ESDAEDLVQETLIAIHAKRATWDRN 70

Query: 61  RPFTAWFFSIARYKLIDHYRGRGRRMFSEVELDETLEAESSVDAVTARMDVERLLNELPE 120
           + FTAW F+IAR+KLIDH R +GRR+   ++    L AE +V+    R D+ R L+ LP 
Sbjct: 71  QSFTAWAFTIARHKLIDHLRRQGRRLTEPLDDASVLLAEHTVEDGVMRRDLTRALSILPA 130

Query: 121 RQRDLIRRVKLEGQSIAEAAEKSGQTELAARVGIHRTLKVLAAK 164
           RQR LI  VK+ G S+AEAAE+ G +  AA+V IHR+ K L A+
Sbjct: 131 RQRALIHDVKVTGLSVAEAAERHGYSVAAAKVSIHRSFKALTAR 174