Pairwise Alignments

Query, 237 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 251 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  130 bits (326), Expect = 3e-35
 Identities = 87/246 (35%), Positives = 123/246 (50%), Gaps = 17/246 (6%)

Query: 3   LIRFCLLFLALATPVNA-----AKLFLTTEVYPPYNLQ------ASDGSVHGVYFDQLKI 51
           L+ F    L LA    A     A L L TE +PPYN+       A + ++ G+  D ++ 
Sbjct: 6   LLAFASTSLLLAGSARAEEPSDASLVLLTENFPPYNMAKNGKNFAKEENIEGIAVDIVRE 65

Query: 52  VLQDTDTDYEVAV-MPWARAIALATTQAMHCVFATARTPEREKLFKWVAPIHTDRNILVA 110
             +     Y + +  PW R   LA  +  + VF  AR P+RE LFKWV PI  D  +L+A
Sbjct: 66  TFKRAGIAYNLTLRFPWERIYKLALEKPGYGVFVMARLPDREALFKWVGPIGPDDWVLLA 125

Query: 111 RREANIEASSLEDARRYRVGTQRGDYTEALLEKLGFPQVDVGADFEITLNKLKLGRIDLM 170
           + ++ I+ + LE AR YR+G  +GD     LEK G   + V  D +    KL  G+IDL 
Sbjct: 126 KADSKIQLAHLEHARPYRIGAYKGDAIAESLEKQGLKPIVVLRD-QDNAQKLMDGQIDLW 184

Query: 171 ----PMSESTLKSLPANSFKEVITLSRQQLGLACNKTVPDQIIAKLQARLDKLIADGTQQ 226
               P      + +     K V+  +  QL LA NK VPD+++AKLQA LD+L  DG   
Sbjct: 185 ATGDPAGRYLARQVGVTGLKTVLRFNSAQLYLALNKDVPDELVAKLQAALDQLRKDGVVD 244

Query: 227 QIFDRY 232
           +I   Y
Sbjct: 245 EIMANY 250