Pairwise Alignments

Query, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  365 bits (937), Expect = e-105
 Identities = 240/687 (34%), Positives = 354/687 (51%), Gaps = 44/687 (6%)

Query: 8   LTIDHDYRYTAAAVVVCMLGSFVTMRLFSKARLATGLQKVNWLFLAGVNGGAAIWTTHFV 67
           LT  +       ++ V +L S+  + L  +   A G     W+    +  G  +W+ HF+
Sbjct: 2   LTGSYSSSLVLISLCVAILASYTALDLTGRIATAKGRAACLWMGGGALAMGIGVWSMHFI 61

Query: 68  AMLGYVAAGDVGYDPYLTGLSLLIAITTTTAGFG---ISAYGGRSVLVEAGGTILGLGIA 124
            ML +    D+GYD  LT  SLLIA+ ++  GF    +S     ++ +  G  I+G GIA
Sbjct: 62  GMLAFSLPIDLGYDLALTAFSLLIAVLSS--GFALWLVSQPSLPALQLGFGALIMGAGIA 119

Query: 125 AMHYTGMAAYNVQGMIFWDQAYVIASLVLGSVLGAIAVNRIARPLNRFCQYS------AV 178
            MHYTGMAA  +   I +D     ASL++     A A+  IA  L R   Y       A 
Sbjct: 120 CMHYTGMAALRMLPGIDYDPTLFGASLLIAVGASAAAL-WIAFRLRRHTPYVRQIRGLAA 178

Query: 179 AFLILAIASMHYTGMASMSFAFDPRIIIPENLLPPAIMGGG--------AIAVTLLLLAL 230
             + +AI  MHYTGMA+ +F        PE     A+ GG          +  TL +LA+
Sbjct: 179 VVMGVAIVGMHYTGMAAANF--------PEGSFCGALGGGLQGDSLVYLVLITTLAVLAV 230

Query: 231 GLSTYVIDAQ----------STQQAVARYRHLSLHDPLTGIPNRAAFIEHLNRRTRHIS- 279
            L T V+DA+          S   A      L+LHD LT +PNR    + + +    ++ 
Sbjct: 231 ALLTSVLDARLEARTAELARSLTLANQELTQLALHDTLTDLPNRTLLADRIEQAIAKVAE 290

Query: 280 MGAHTALLSIDLDRFKEINDVHGHAAGDAVLRAIADRASSVLKAGEFLARMGGDEFVAMT 339
            G   AL+ IDLD FK +ND  GH  GD +L+A+A R    L + + LAR+GGDEFV + 
Sbjct: 291 QGGCFALMFIDLDGFKPVNDAFGHHIGDLLLKAVAARLRGHLHSQDTLARIGGDEFVLLV 350

Query: 340 HSYYTRADGAEFAQRLIEQISKPVEWNGQTFSVGASVGISVRNTGSIDADTLMAQADVAM 399
                  D  + A + +  +S+P         + AS+GI +      D   L+  AD AM
Sbjct: 351 ELQEPN-DAMDVAVKQVNLVSRPFRVAEHDLQLSASLGIVLYPGNGQDQHELLRNADAAM 409

Query: 400 YRAKSATSDTICFYDKSMDEAARARNALAIAMRSGLANNEFELYYQQQNDTKSGSIVGFE 459
           Y AKSA  +   F+D SM+  AR +  L   +R  L   +F L+YQ + D ++   +G E
Sbjct: 410 YHAKSAGKNGYSFFDVSMNSNARQQLQLLQDLRLALEQRQFRLHYQPKFDAQACQPIGAE 469

Query: 460 ALLRWKHPERGMVSPVEFIPIAEQTGFIVELGEWVLREACAQAARW----KKSLAIAVNV 515
           ALLRW+HP++G++ P  FI +AE+TG I+ +GEWVL EAC Q  +W         +AVN+
Sbjct: 470 ALLRWEHPQQGLLLPDRFIGLAEKTGLIIPIGEWVLTEACRQMRQWLDQGHHGWRMAVNL 529

Query: 516 APQQLADNDFPDKVERILAETGLAPERLELEITEGSIIADHRHALVTIRKLKSLGVKIAM 575
           +  Q       D V R L + GL    L LEITE + + D   +L  +++L  +GV +++
Sbjct: 530 SAIQFCHAGLVDSVARALQQNGLPANCLTLEITETTAMHDADASLTVLQRLSDMGVDLSI 589

Query: 576 DDYGTGYSSLSTLQSFPFDKIKIDRAFIDGLSTNVQSEAIVRSTLILAHSLNIPVLAEGV 635
           DD+GTGYSSL  L+  P +++KIDR F+  L  +    AIV + + L  +L + ++AEGV
Sbjct: 590 DDFGTGYSSLMYLKRLPANELKIDRGFVRDLEQDSDDAAIVSAIVALGQALGLRIVAEGV 649

Query: 636 ETKAHIEFLRREGCLQVQGFFFGKPGP 662
           ET    +FL R GC  +QG+  G+P P
Sbjct: 650 ETDKQQDFLTRLGCDSLQGYLLGQPVP 676