Pairwise Alignments

Query, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  335 bits (859), Expect = 5e-96
 Identities = 211/658 (32%), Positives = 350/658 (53%), Gaps = 41/658 (6%)

Query: 49  WLFLAGVNGGAAIWTTHFVAMLGYVAAGDVGYDPYLTGLSLLIAITTT-TAGFGISAYGG 107
           W  L        IW  HF++ML + A  DV YD  LT LSLLIA+     A   +     
Sbjct: 62  WNMLGACCLAGGIWAMHFISMLAFRAPVDVHYDVSLTILSLLIALGVAWLAMHSLERSNM 121

Query: 108 RSVLVEAGGTILGLGIAAMHYTGMAAYNVQGMIFWDQAYVIAS--LVLGSVLGAIAVNRI 165
           R+        ++GLGI  MH+ GMAA       ++    ++AS  + L + L A+ + R 
Sbjct: 122 RAHYFVPSAGLIGLGIILMHFVGMAAMETGARQYYQTGLLLASAAIALLTALTALYLARY 181

Query: 166 AR----PLNRFCQYSAVAFLILAIASMHYTGMASMSFAF--DPRIIIP--ENLLPPAIMG 217
            R     L +  +Y A   +   I + H+T M++M+     D  + +P  +N L    +G
Sbjct: 182 LRNGSGTLYQAMKYGASLLMAGGIVATHFTAMSAMTLVIPADTALRLPSGDNSLQ---LG 238

Query: 218 GGAIAVTLLLLALGLSTYVIDAQ----------------STQQAVARYRHLSLHDPLTGI 261
            G   +TLL+    +S  + D +                   QA A  +  + +D LT +
Sbjct: 239 LGIGFITLLISGASISAALADKKLQSKEHDLRRVSVLLSQLDQARASLQQAAHYDALTNL 298

Query: 262 PNRAAFIE-HLNRRTRHISMGAHTALLSIDLDRFKEINDVHGHAAGDAVLRAIADRASSV 320
            NR  F +    R   H +     A++ +D+D FK IND  GH AGD +L+ IA+   + 
Sbjct: 299 LNRRGFNQVFAERLVEHQASENRLAVMFLDIDHFKRINDSLGHDAGDELLKVIANHIKAA 358

Query: 321 LKAGEFLARMGGDEFVAMTHSYYTRADGAEFAQRLIEQISKPVEWNGQTFSVGASVGISV 380
            +  + +AR GGDEF  +T S  +R +    AQR+++++  P++  G+   +  S+GIS+
Sbjct: 359 TRNHDLVARFGGDEFCVVT-SLNSRDEARHLAQRIMQRMKDPIDLGGRRMVMTTSIGISI 417

Query: 381 RNTGSIDADTLMAQADVAMYRAKSATSDTICFYDKSMDEAARARNALAIAMRSGLANNEF 440
                  A+ L+  AD+A+Y++K    +++ F++ S+   ARA  AL +     LA  E 
Sbjct: 418 FPDDGSTAEELLKHADLALYQSKDNGRNSLNFFNDSLK--ARASIALQLEEELRLALLEE 475

Query: 441 E---LYYQQQNDTKSGSIVGFEALLRWKHPERGMVSPVEFIPIAEQTGFIVELGEWVLRE 497
               ++YQ   D +SG +   EAL+RW+HP+ G++ P  F+ IAE  G I++L  WVLR 
Sbjct: 476 RGLCVHYQPIFDLRSGQVAKLEALVRWQHPQHGLLGPDRFVGIAEANGLIIDLDLWVLRH 535

Query: 498 ACAQAARWKK----SLAIAVNVAPQQLADNDFPDKVERILAETGLAPERLELEITEGSII 553
           ACA  A  ++     + + VN +   L+ ++ P++VE+ L   GLAP  LELE+TE +++
Sbjct: 536 ACADLAHLQRHGYGEVQVTVNCSAVTLSHDELPNEVEKALFHAGLAPRHLELEVTENALV 595

Query: 554 ADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQSFPFDKIKIDRAFIDGLSTNVQSE 613
            D +  +  ++++++LGV +++DD+GTGYSSL+ L+  P D +KIDR F+  +  + +  
Sbjct: 596 GDIQRTVSLLKRVRALGVALSIDDFGTGYSSLAYLKRLPLDVLKIDRTFLQDVPGSQKDR 655

Query: 614 AIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGCLQVQGFFFGKPGPLTSIANLVD 671
            IV++ + +AH+L++ V++EGVET     FL   GC  +QG+  G+P PL  +  L++
Sbjct: 656 EIVQAIIAMAHTLHLRVVSEGVETAEQQAFLESHGCDYLQGYLLGRPVPLAELRPLLE 713