Pairwise Alignments

Query, 459 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 479 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  181 bits (459), Expect = 5e-50
 Identities = 141/469 (30%), Positives = 231/469 (49%), Gaps = 34/469 (7%)

Query: 19  WRSAGRWLRHWLPTGLYTRSLLIIILPMILLQAVVAAVFMERHWQLVTERLSAAVTRDIS 78
           WR   RW R W P  L  R  LI++L M+  QA+ ++V+ +  ++   E     V+  ++
Sbjct: 12  WR---RW-RPW-PGSLGGRLALILVLGMLAAQALTSSVWFDMRYRHAMEMPIRLVSIQLA 66

Query: 79  AVIELLQTDPEEDDYQRVIRIAREKLDLSVYIEPKTDLPAPKP--EPLFSILDRILADQL 136
             + +L+  P E   Q +  +  +   L++   P   +P P    E +  IL + L+D+L
Sbjct: 67  DTLRILRGLPLESVPQTLPHLGSDSFRLALRDGPMPGMPRPDNTLEAVQDILSQSLSDRL 126

Query: 137 KQQIGRPFW----IDTYGNGSLV-------------EIRVQLEDKT---LRVFTSRSSA- 175
              +          D  G  + V              I +QL  ++   + V  S +   
Sbjct: 127 GSGVDATLLSAELADDAGKSANVWALLNAREPVGHFRIALQLPSQSHQWIEVMASEAQGG 186

Query: 176 -----YASNTHIFLVWMVGASLVLIAISILFLRGQIKPIEALAKAAENFGKGQKISGYSP 230
                ++      L   V   +V +AI+++ +R  ++P+  LA AA+  G+       + 
Sbjct: 187 IEAKPFSIVADYVLRIYVLRIMVFVAIALVAVRLALRPLRRLADAADALGRDLHSPPLAE 246

Query: 231 RGADEVRRAGLAFILMRERIERQMEQRTAMLNGVSHDLRTILTRFKLQLALAGDNPDLEG 290
            G  EVR+A   F LM+ R+ + + +RT  L  VSHDLR+ +TR +L+          + 
Sbjct: 247 GGPREVRQAARTFNLMQRRLIQDIGERTRFLAAVSHDLRSPITRLRLRAEFLPPGEMQDK 306

Query: 291 LDKDVDDMQSMLEAYLTFARTEVE-EDVGTLELPALLEKIGHDFELHGKKFSYQLYNIER 349
             KD+ DM+S++ + L + R E   E   ++++ +LL  +  DFE  G   + Q    + 
Sbjct: 307 FRKDLGDMESLIASTLDYIRGEDRSEPRQSVDVNSLLAGLRADFEETGGVVTLQGQARDP 366

Query: 350 IIARPNALSRLVANLAENARRYASNLHVDIRKAPRSIIMTFDDDGPGIPEISREDVFKPF 409
           + A   +L R V NL ENA RY S  HV I  + +++ +  +D GPGIPE S E VF+PF
Sbjct: 367 LPAYATSLRRCVQNLIENAIRYGSAAHVRIEDSAQALRIRIEDTGPGIPEASLEQVFEPF 426

Query: 410 FRLDEARNLNASGTGLGLSIVRDIARSHGGDVSLDESPMGGLRVIVKIP 458
            RL+E+RNL + GTGLGLSI R IA +H G ++L     GGL  ++ +P
Sbjct: 427 LRLEESRNLASGGTGLGLSIARSIATAHDGSITLRNRSEGGLEALLILP 475