Pairwise Alignments

Query, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

Subject, 1082 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Variovorax sp. SCN45

 Score = 1239 bits (3206), Expect = 0.0
 Identities = 674/1154 (58%), Positives = 813/1154 (70%), Gaps = 111/1154 (9%)

Query: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60
            MPKR D+KSILIIGAGPI+IGQACEFDYSG QACKAL+EEGY+VIL+NSNPATIMTDP  
Sbjct: 1    MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT 60

Query: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYN-------V 113
            AD TY+EPIT + V KIIAKERPDA+LPTMGGQTALN AL L R GVLD+Y        V
Sbjct: 61   ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPV 120

Query: 114  EMIGAKPEAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKL 173
            E+IGA PEAID                              K  DR   + A T++    
Sbjct: 121  ELIGATPEAID------------------------------KAEDRLKFKDAMTKI---- 146

Query: 174  SGAELDKALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGG 233
                             LG     +  I+H+M  A      VG P +IRPSFT+GGTGGG
Sbjct: 147  ----------------GLGSA---RSGIAHSMDEAWAVQKSVGFPTVIRPSFTLGGTGGG 187

Query: 234  IAYNRSEFFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPM 293
            IAYN  EF  I   G++ASPT E+LIEES+LGWKEYEMEVVRDKADNCII+CSIEN+DPM
Sbjct: 188  IAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPM 247

Query: 294  GVHTGDSITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEM 353
            GVHTGDSITVAPA TL+DKEYQ++RNAS+AVLREIGV+TGGSNVQF++NPKDGR+VVIEM
Sbjct: 248  GVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRMVVIEM 307

Query: 354  NPRVSRSSALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIP 413
            NPRVSRSSALASKATGFPIAKVAAKLA+GYTLDEL N+ITGGATPASFEPSIDYVVTKIP
Sbjct: 308  NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIP 367

Query: 414  RFAFEKFPGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGYEEG 473
            RFAFEKFP A   LTT MKSVGEVMA+GRTF ES QKALRG+E G+ GL+        E 
Sbjct: 368  RFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLN--------EK 419

Query: 474  EGSKNAIRAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIR 533
               +  +   +G P P+R+  V  A  MG+S +EV   +KIDPWF+ Q++ IV +E  + 
Sbjct: 420  TQDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIELELE 479

Query: 534  EHGLPQ-DAENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFA 592
               L   D + L  LK  GFSD RLA         + E R +L VRPV+KR+DTCAAEFA
Sbjct: 480  TKSLDDIDRDTLLALKKKGFSDRRLARQLKTTDTAIREKRRALGVRPVYKRVDTCAAEFA 539

Query: 593  SPTAYMYSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDA 652
            + TAYMYSTYE         EA  +D+KK+++LGGGPNRIGQGIEFDYCC HAA A+++ 
Sbjct: 540  TNTAYMYSTYED------ECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRED 593

Query: 653  GFEAIMINCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPL 712
            G+E IM+NCNPETVSTDYDTSDRLYFEPLT EDV+EI+    +K + +GVIVQ+GGQTPL
Sbjct: 594  GYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIV----DKEKPLGVIVQYGGQTPL 649

Query: 713  KLAEALEKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEI 772
            KLA  LE NG+PI+GT+PDMID AEDR+RFQKLL +L L QP N  A +  +A   A+ +
Sbjct: 650  KLALDLEANGVPIIGTSPDMIDAAEDRERFQKLLHELKLLQPPNATARTEAEALEKAAAL 709

Query: 773  GFPLVVRPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGK 832
            G+PLVVRPSYVLGGRAM+I+H +  L+ Y+ + V          +  ND           
Sbjct: 710  GYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAV----------KVSND----------- 748

Query: 833  NPLLFDSYLTNAVEVDVDALCDGE-NVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETL 891
            +P+L D +L +AVE DVD L D E    + G+MEHIE+AG+HSGDSACSLP  SLS +T+
Sbjct: 749  SPVLLDRFLNDAVECDVDCLRDAEGQTLIGGVMEHIEQAGVHSGDSACSLPPYSLSADTV 808

Query: 892  DELERQTTALAKALKVGGLMNVQYAI--KDG--TIYVLEVNPRASRTVPFVAKTIGAPIA 947
             EL+RQ+ A+A AL V GLMNVQ+AI  KDG   IYVLEVNPRASRTVP+V+K  G  +A
Sbjct: 809  AELKRQSAAMAAALNVVGLMNVQFAIQQKDGKDVIYVLEVNPRASRTVPYVSKATGIQLA 868

Query: 948  KIAARVMAGEKLDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEV 1007
            K+AAR MAG+ L +        P      + +VKEAVFPF +FPGVD +LGPEM+STGEV
Sbjct: 869  KVAARCMAGQSLKSQGVTKEVTP-----PYFSVKEAVFPFVKFPGVDTILGPEMKSTGEV 923

Query: 1008 IGLDTDFALAFAKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGT 1067
            +G+   F  AF KSQLGAG  LP+SG VF+SV++ DK   +   R LV+ GF + AT GT
Sbjct: 924  MGVGKTFGEAFVKSQLGAGTHLPKSGKVFISVKNNDKARAVEVARGLVKLGFVLTATKGT 983

Query: 1068 QRFLAEQGINAEKINKVQEGRPHIEDAIRNRQVQLVINTTDSNK-AISDSKSLRRATLMQ 1126
               +   GI    +NKV EGRPHI D I+N ++ LVINT +  + AI+DS+ +R + L+ 
Sbjct: 984  AAAINAAGIECATVNKVTEGRPHIVDMIKNNEIALVINTVEERRNAITDSRQIRTSALLA 1043

Query: 1127 KVPYYTTMAGAEAA 1140
            +V  +TT+ GAEAA
Sbjct: 1044 RVTTFTTIFGAEAA 1057