Pairwise Alignments

Query, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

Subject, 1076 a.a., Carbamoyl-phosphate synthase large chain from Pseudomonas putida KT2440

 Score = 1247 bits (3226), Expect = 0.0
 Identities = 671/1147 (58%), Positives = 814/1147 (70%), Gaps = 95/1147 (8%)

Query: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60
            MPKR DIKSILI+GAGPIVIGQACEFDYSG QACKAL+EEG+RVILVNSNPATIMTDP +
Sbjct: 4    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAM 63

Query: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP 120
            ADATY+EPI  + VAKII KERPDA+LPTMGGQTALN AL L+R GVL+++ VEMIGA  
Sbjct: 64   ADATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANA 123

Query: 121  EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK 180
            + ID AEDR+ F +AM  IG                            L+   SG     
Sbjct: 124  DTIDKAEDRSRFDKAMKDIG----------------------------LECPRSG----- 150

Query: 181  ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE 240
                                I+H+M  A   ++ +G P IIRPSFTMGGTGGGIAYNR E
Sbjct: 151  --------------------IAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREE 190

Query: 241  FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300
            F EI   GLD SPT E+LI+ES++GWKEYEMEVVRDK DNCII+CSIEN DPMGVHTGDS
Sbjct: 191  FEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDS 250

Query: 301  ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS 360
            ITVAPA TLTDKEYQ+MRNAS+AVLREIGVETGGSNVQF + P  GR+VVIEMNPRVSRS
Sbjct: 251  ITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNPRVSRS 310

Query: 361  SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420
            SALASKATGFPIAK+AAKLAIGYTLDEL+NDITGG TPASFEPSIDYVVTK+PRFAFEKF
Sbjct: 311  SALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPRFAFEKF 370

Query: 421  PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLD-EIEIPGYEEGEGSKNA 479
            P A   LTT MKSVGEVMAIGRTF ESLQKALRG+E G  GLD ++++   E    + + 
Sbjct: 371  PKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGACGLDPKVDLASPE----AASI 426

Query: 480  IRAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHGLPQ 539
            ++  +  P  +R+  VA AMR GM+ EE+   + ID WF+ Q++ ++  E +++   L  
Sbjct: 427  LKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVKTLALSA 486

Query: 540  -DAENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYM 598
             D + +  LK  GFSD RLA L     K +   R+ L V PV+KR+DTCAAEFA+ TAY+
Sbjct: 487  IDKDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFATDTAYL 546

Query: 599  YSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIM 658
            YSTYE         EA  S R K++ILGGGPNRIGQGIEFDYCC HAA AL++ G+E IM
Sbjct: 547  YSTYE------EECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 600

Query: 659  INCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEAL 718
            +NCNPETVSTDYDTSDRLYFEPLT EDV+E+ R E+ K    GVIV +GGQTPLKLA AL
Sbjct: 601  VNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPK----GVIVHYGGQTPLKLARAL 656

Query: 719  EKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVV 778
            E+ G+PI+GT+PD ID AEDR+RFQ+++ +L L QP N    S E+A   A  IG+PLVV
Sbjct: 657  EEAGVPIIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEAIRAAGSIGYPLVV 716

Query: 779  RPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFD 838
            RPSYVLGGRAM+I++   +L+ YL + V          +  ND           +P+L D
Sbjct: 717  RPSYVLGGRAMEIVYELDELKRYLREAV----------QVSND-----------SPVLLD 755

Query: 839  SYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQT 898
             +L  A+E+DVDA+CDG +V +  IM+HIE+AG+HSGDSACSLP  SLSKE  DE+  Q 
Sbjct: 756  HFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQV 815

Query: 899  TALAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEK 958
              +A  L V GLMNVQ A++   IYV+EVNPRASRTVPFV+K IG  +A IAARVMAG+ 
Sbjct: 816  KKMALELGVVGLMNVQLALQGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKT 875

Query: 959  LDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAF 1018
            L      + ++  P      +VKEAVFPFA+FPGVD +LGPEM+STGEV+G+   F  AF
Sbjct: 876  LKE--LGFTQEIIP---NFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAF 930

Query: 1019 AKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGINA 1078
            AK+Q+GA   LP  GT F+SVRD+DK  V    R L+  GF+V+AT GT + +   G+  
Sbjct: 931  AKAQMGASEVLPTGGTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKV 990

Query: 1079 EKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAE 1138
             ++NKV EGRPH+ D I+N +V L+INTT+  ++I+DS S+RR  L  K+   TT+A  E
Sbjct: 991  RRVNKVTEGRPHVVDMIKNDEVSLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGE 1050

Query: 1139 AAALAIK 1145
            A   A+K
Sbjct: 1051 AICEALK 1057