Pairwise Alignments

Query, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

Subject, 1074 a.a., carbamoyl-phosphate synthase large subunit from Erwinia tracheiphila SCR3

 Score = 1206 bits (3121), Expect = 0.0
 Identities = 656/1149 (57%), Positives = 804/1149 (69%), Gaps = 96/1149 (8%)

Query: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60
            MPKR DIKS+LI+GAGPIVIGQACEFDYSG QACKAL+EEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60

Query: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP 120
            ADATY+EPI  +VV KII KERPDA+LPTMGGQTALN AL L+R GVL  + V MIGA  
Sbjct: 61   ADATYIEPIHWQVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVAMIGATA 120

Query: 121  EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK 180
            +AID                              K  DR+                  DK
Sbjct: 121  DAID------------------------------KAEDRQ----------------RFDK 134

Query: 181  ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE 240
            A+  +       ET R    I+H M  A +  + VG P IIRPSFTMGG+GGGIAYNR E
Sbjct: 135  AMKKIGL-----ETARSG--IAHTMEEALKVAEEVGFPCIIRPSFTMGGSGGGIAYNREE 187

Query: 241  FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300
            F EI   GLD SPT E+LI+ES++GWKEYEMEVVRDK DNCII+CSIEN D MG+HTGDS
Sbjct: 188  FEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDS 247

Query: 301  ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS 360
            ITVAPA TLTDKEYQ+MRNAS+AVLREIGVETGGSNVQF+VNP++GRL++IEMNPRVSRS
Sbjct: 248  ITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPENGRLIIIEMNPRVSRS 307

Query: 361  SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420
            SALASKATGFPIAK+AAKLA+G+TLDEL NDITGG TPASFEPSIDYVVTKIPRF FEKF
Sbjct: 308  SALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKF 367

Query: 421  PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLD-EIEIPGYEEGEGSKNA 479
             GA+  LTT MKSVGEVMAIGRTF ES+QKALRG+E G  G D ++++   E    +   
Sbjct: 368  AGANDRLTTQMKSVGEVMAIGRTFQESIQKALRGLEVGAHGFDPKVDLNDAE----ALTI 423

Query: 480  IRAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHGL-P 538
            IR  +     +R+  VA A R GMS E V   + ID WF+ Q++ ++ +E ++   G+  
Sbjct: 424  IRRELKDAGSERIWYVADAFRAGMSLEGVFNLTNIDRWFLVQIEELIGLEGQVAREGING 483

Query: 539  QDAENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYM 598
               ++LR LK  GF+DARLA L      EV +LR    + PV+KR+DTCAAEF++ TAYM
Sbjct: 484  LTVDSLRTLKCKGFADARLAKLAGVTESEVRKLREQYQLHPVYKRVDTCAAEFSTDTAYM 543

Query: 599  YSTYETPFVGAARSEAQVS-DRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAI 657
            YSTY+         EA  + DR KV+ILGGGPNRIGQGIEFDYCC HAA AL++ GFE I
Sbjct: 544  YSTYD------EECEANPNQDRDKVMILGGGPNRIGQGIEFDYCCVHAALALREDGFETI 597

Query: 658  MINCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEA 717
            M+NCNPETVSTDYDTSDRLYFEP+T EDV+EI+R E+ K    GVIVQ+GGQTPLKLA  
Sbjct: 598  MVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPK----GVIVQYGGQTPLKLARE 653

Query: 718  LEKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLV 777
            LE  G+P++GT+PD ID AEDR+RFQ+ + +L L QP N    +++QA   A +IG+PLV
Sbjct: 654  LEVAGVPVIGTSPDAIDRAEDRERFQQAVERLGLKQPANATVTALDQAVEKAVKIGYPLV 713

Query: 778  VRPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLF 837
            VRPSYVLGGRAM+I++ E  L+ Y    V                     ++    P+L 
Sbjct: 714  VRPSYVLGGRAMEIVYDETDLKRYFQTAV---------------------SVSNDAPVLL 752

Query: 838  DSYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQ 897
            D +L +AVEVDVDA+CDGE V + GIMEHIE+AG+HSGDSACSLP+ +LS+     + +Q
Sbjct: 753  DRFLDDAVEVDVDAICDGERVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQAIQAVMRQQ 812

Query: 898  TTALAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGE 957
               LA  L V GLMNVQ+A+KD  +Y++EVNPRA+RTVPFV+K  G P+AK+AARVMAG+
Sbjct: 813  VEKLAFELCVRGLMNVQFAVKDNEVYLIEVNPRAARTVPFVSKATGLPLAKVAARVMAGK 872

Query: 958  KLDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALA 1017
             L  A     E+  P    + +VKE V PF +F GVD +LGPEMRSTGEV+G+   FA A
Sbjct: 873  TL--AEQGVTEEVIP---PYYSVKEVVLPFNKFQGVDPILGPEMRSTGEVMGVGRTFAEA 927

Query: 1018 FAKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGIN 1077
            F K+ LGA  ++ RSG   +SVR+ DK+ ++     L + GF++ AT GT   L E GIN
Sbjct: 928  FGKAMLGAQTNMKRSGRALLSVREGDKKRIVDLAAKLQKLGFELDATHGTAVVLGEAGIN 987

Query: 1078 AEKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGA 1137
               +NKV EGRPHI+D ++N +   ++NTT   +AI DS+++RR+ L  KV Y TT+ G 
Sbjct: 988  PRLVNKVHEGRPHIQDRLKNGEYAYIVNTTAGRQAIEDSRAIRRSALQYKVHYDTTLNGG 1047

Query: 1138 EAAALAIKA 1146
             A   ++ A
Sbjct: 1048 FATVTSLNA 1056