Pairwise Alignments

Query, 696 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  319 bits (817), Expect = 3e-91
 Identities = 219/696 (31%), Positives = 340/696 (48%), Gaps = 86/696 (12%)

Query: 1   MPKKTNLMTRILVAASSLVVAAFAGFSYYIDSLQHRVTTEAVAENIDSSGKQAAQSIANW 60
           M K      +IL+AAS +V+ AF+ F+ Y D LQ     E +   +   G   + +I N 
Sbjct: 1   MNKSLRFSHKILLAASLIVILAFSLFTLYNDYLQRNAIREDLENYLAEMGASTSTNIRNL 60

Query: 61  LNGRIMLTQTVAATLAKLPDDEAKLRFLENDVLTAQFMSTYFGNAETGTFTTFPKTPLPE 120
             GRI L + +A  +A+ P +   L  +  + L + F++ Y G  + G F+  P   +P+
Sbjct: 61  FEGRIKLVENLAQNIAQDPANAETL--MGQNALISSFLTVYLGKVDGG-FSVRPDAKMPD 117

Query: 121 GYDPRKRPWYLDAVKAGKTVLTEPYNDASTGGLIITAAIPVSIDGKLAGVTGSDFSLDSL 180
           GYDPR RPWY D + A    LTEPY D +T  ++I     VS      GV G D +LD L
Sbjct: 118 GYDPRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILSKVSSS---VGVVGGDLALDGL 174

Query: 181 VKMIKSVDAGTDGYAFLVSKDGKILIHPDPKFVDKPLADLFKVDTPAISSAISQTEIDGK 240
           V++I S++ G  GYAFLV+  GKIL+HPD   V K L+DLF   TP ++  +++ + DG+
Sbjct: 175 VQIINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHTPKLTGELTEVQSDGQ 234

Query: 241 GKITSFIPVAGLPSVDWYLGFVVDSDVAYSAIGQFRLAATIATVLAAAIMIGLLATVLSR 300
            ++ +F P+ GLPS +WY+G  VD D A+S +  FR +A IATV+A  I+IGLL  +L R
Sbjct: 235 TRLLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGLLG-LLIR 293

Query: 301 FIVRPVTQMTSAMEGLAAGNLDVGIPGQERTDQIGSMAAAVAVFRSNAMERLRLEGDAEQ 360
            +++P+  MT AME +A G  D+       T ++   +        NA  R         
Sbjct: 294 VLMQPLHTMTRAMEDIAEGEGDL-------TKRLHIHSHDEFGVLGNAFNRF-------- 338

Query: 361 NRTLSEQERNERERTAAKDAADIQFAVDSLAKGLAHLSDGDLNYRIDTPFVTRIDRLRND 420
                     ER  ++ ++ +     V+ +A  +   S+  +         T  D   N 
Sbjct: 339 ---------VERIHSSIREVSSATEQVNEVALRVISASNSSM---------TNSDEQSNR 380

Query: 421 FNNSVAKLNAALSTVGQNALAIDAGAGEIRQSADDLARRTEQQAASVEETAAALEEITTT 480
             NSVA   AA++ +G  A  I   A +  Q A       E+    VE   AA+  ++  
Sbjct: 381 -TNSVA---AAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDL 436

Query: 481 VKDSARRAEEVGRLVDRARGNAEQSGVIVEDAVRAMEGIEKSSSEISNIIGVIDEIAFQT 540
           +  S+                              +E +   +  I  I+ VI  I+ QT
Sbjct: 437 IVTSSAH----------------------------IETLNSKTVNIGQILEVITSISQQT 468

Query: 541 NLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKAIKTLI-------------- 586
           NLLALNA +EAARAGEAG+GFAVVA EVR LA R+  +A+ ++T+I              
Sbjct: 469 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTM 528

Query: 587 NASTSQVQSGVELVGNAGKALETIVREVQEINRHIDAIVTSSREQSTGLQEINTAINTID 646
             S    Q  +++   AG+ L+++   + EI+    ++ T++ EQ+  ++ IN  IN I+
Sbjct: 529 EQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEIN 588

Query: 647 QGTQQNAAMVEEQTAASHGLASEAAALNELLAQFQL 682
              Q+    ++    A   L  +A  L  L+  F++
Sbjct: 589 MLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFRI 624