Pairwise Alignments

Query, 465 a.a., multidrug efflux protein from Agrobacterium fabrum C58

Subject, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

 Score =  267 bits (682), Expect = 6e-76
 Identities = 160/441 (36%), Positives = 231/441 (52%)

Query: 19  SHFKATLVLGIPLIGAQLAQLGIHTTDMVIVGQLGAEKLAAMVLAGQFFFVVFIFGSGFS 78
           +  KA L L  PLI +QLA + +  TD +++ ++  + LA   L    +  V IF  G  
Sbjct: 7   TELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVI 66

Query: 79  VAVVPMVAQAYGQGDATSARRSLRMGMWVAIAYWLLALPIFFNAERILVYLGQNPNVAAL 138
            AV  +VA   G  D   A R  + G+W+A A  L A  + +N E +L+  GQ P   A 
Sbjct: 67  AAVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVAS 126

Query: 139 TGHYLAIAKFGLLPALLFYVLRGLVSAIGRAGIILYVTIIMLVMNGLMAYVLVFGHFGLP 198
              +L +    L   L F  LRG  SA+GR+  ++ +++   V+N L    L+ G FGLP
Sbjct: 127 AAEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFGLP 186

Query: 199 AMGMNGAAVVAVIVNAFSFIFIVAYVQTREETKKYELFVRFWRPDWHALFEVLRLGLPIS 258
            +G+ G  +V  +V+      +  Y++       Y L     RP   AL E+ RLGLPI 
Sbjct: 187 KLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLPIG 246

Query: 259 ITILAEVTLFAAASILMGQIGTVQLAAHGIALQLASIAFMIPLGLSQAATVRVGVARGQG 318
            T + EV LFA A++ MG +G+ +LAAH IALQ+ S AFM+P GLS A T+RVG+  G G
Sbjct: 247 GTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAG 306

Query: 319 DFKNLIRASIMIYAIACGIALCGGILFAAVPEFLAKWFLDPKLPEAAEVLAYASSLVVIA 378
           +      A  +       I      LF  +PE L   F+D   P  A +   A  L+++A
Sbjct: 307 NLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQLLMVA 366

Query: 379 GIFQLVDGIQAVTAGLLRGLKDARIPAMLALISYWPIGLALAWTMAFPLGFGGRGVWFGF 438
             F+L DG+Q +  G +RGLKDA+   ++ L+ YW +G   AW   F LG G  G+W+G 
Sbjct: 367 AWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFTLGGGAVGIWWGL 426

Query: 439 VIGLSTAAVLLTVRFVLLVKR 459
            +GL+ AAV LT  F   +KR
Sbjct: 427 ALGLACAAVALTFGFEWRMKR 447