Pairwise Alignments

Query, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

Subject, 378 a.a., carbamoyl phosphate synthase small subunit from Pseudomonas simiae WCS417

 Score =  363 bits (932), Expect = e-105
 Identities = 193/381 (50%), Positives = 244/381 (64%), Gaps = 8/381 (2%)

Query: 14  AMLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIGNVG 73
           A+L LADG++  G  IGA G+   EV FNTA+TGY+EILTDPSY  QIVT T+PHIGN G
Sbjct: 5   AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64

Query: 74  TNEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRALTA 133
           T  ED+E    + R  + G++ +      SN+R    L  +LKA  V+ + GIDTR LT 
Sbjct: 65  TTPEDVE----SDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTR 120

Query: 134 WIRENGAPNAVIAHDPNGVFDIEALKAEAKAWSGLVGLDLAIEATSGQSSTWTETPW-VW 192
            +RE G+ N  I    N     EA  A A+ + GL G+DLA   +  +   W  T W + 
Sbjct: 121 ILREKGSQNGCIMVGDN--ISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTVWDLK 178

Query: 193 NKGYGTLGEADAKYHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAEDILALKPDGVFL 252
              + T+  AD  YHVV  D+GVK NILR+     C+VTVVPAQT A D+LAL+PDGVFL
Sbjct: 179 TDSHATIDAADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFL 238

Query: 253 SNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEKMHQGHHGANHPV 312
           SNGPGDP    +YA+  I++++++E+P+FGICLGHQ+L LA GAKT KM  GHHGANHPV
Sbjct: 239 SNGPGDPEPC-DYAIQAIKDVLETEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPV 297

Query: 313 KDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVFSVQHHPEAS 372
           +D  TG V I S NHGFAVD  +LP  V   H SLFDG+  G+    K  FS Q HPEAS
Sbjct: 298 QDLDTGVVMITSQNHGFAVDEATLPSNVRAIHKSLFDGSLQGIERTDKSAFSFQGHPEAS 357

Query: 373 PGPQDSHYLFRRFVNLLRENK 393
           PGP D   LF RF+N + + +
Sbjct: 358 PGPNDVAPLFDRFINEMAKRR 378