Pairwise Alignments

Query, 850 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

Subject, 1003 a.a., Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  259 bits (661), Expect = 7e-73
 Identities = 180/554 (32%), Positives = 286/554 (51%), Gaps = 47/554 (8%)

Query: 10  LTNCDREPIHIPGYIQPHGCLIACDNAMRMVLRHSENCGELLGLEGDLNGRTAEDVLGKK 69
           L  C REPI +PG IQPHG L++       + + S NC    G+        A+++LGK 
Sbjct: 23  LAECAREPIRVPGAIQPHGVLLSVAGDPLCIEQVSANCATEFGM-------AADELLGKP 75

Query: 70  LVHDL---RNALT--VTGRTTRPAMLPAMETSDGRSFDISLHRYKSTTIIEFEPSGSDAQ 124
           L   L   ++AL     G    P + P   T     +  SL R     IIE EP      
Sbjct: 76  LSWLLSPEQSALIDHAYGHPAAPHIDPIKLTIGTAHYSASLQRADDVLIIELEPFVETGH 135

Query: 125 PLGTAR---KMVDRIREADSVESLISRTTRLVKATLGYDRVMIYRFQEDGAGKVVSEAKQ 181
             G +R   +++  ++ A ++E+L   +   ++A  GYDRVMIYRF+ +G G+VV++A  
Sbjct: 136 --GQSRIITRVLRNLQAATTLETLFDISVHEIQALTGYDRVMIYRFEPEGHGQVVAQALT 193

Query: 182 PELESFLGQYFPASDIPQQARALYLKNTLRIISDASGTRIPVLPAV-DVSGEPLDLSYAH 240
             L S+ G  FP SDIP QAR LY  N +R+I DA+   +P++P +   +G+PLDL ++ 
Sbjct: 194 GPLPSYSGLNFPGSDIPAQARELYRLNWIRVIPDATYVPVPLIPTLRPATGQPLDLGFST 253

Query: 241 LRSVSPIHCEYLRNMGVAASMSISVIVDGALWGLIACHHYSPRVLSMPVRIAAEMFGEFF 300
           LRSVSP+HCEYL+NMGV +SMSIS++  G LWGL+AC H  P  +S  +R A  M G+  
Sbjct: 254 LRSVSPVHCEYLKNMGVRSSMSISLLDGGELWGLVACGHPEPLRVSRELRDACAMIGQLL 313

Query: 301 SMHLQVLK----QKRRLDTINHAHAALDRFLRLAAHHANIEELLVDSFQDFADLMPCDGV 356
           S+ +  +     Q+ R + +       D   R  A+H  + + LV   +    L   DG 
Sbjct: 314 SVKISAIVATNIQREREEKVVLLGQLADAMSR--ANH-EVLDGLVSRPELLMSLTLADGA 370

Query: 357 GLWVGNNWHGHGATPPHDAIPRLARFV-------------ASASEG-RVWATHALSQAIP 402
            + + +  +  G  P  + +  L  ++             A+  +G  V+ T+++ + + 
Sbjct: 371 AVLIDDQVYLFGTCPSIEQVRELYTWIRDTGLASQRSRQRATGLQGLGVFHTNSMQRELA 430

Query: 403 EAEIYAGTAAGMLAIPLSQVKSDYLLFFRKEIVQNLNWAGNPEKSYETGP---MGDRLTP 459
           ++ +Y   A+G++A  L +   + +++FR ++   +NW+GNP     T P      RL P
Sbjct: 431 DSAVYRDIASGVIAFTLPKPIDNAVMWFRAQLTSTMNWSGNPTHHVSTRPESSASHRLHP 490

Query: 460 RKSFAIWKETVRLQAQPWSEADREIAEAARIALVEVAFHHSELMAGERERAEVRQR-MLN 518
           R+SF +W++ V   A PWS AD   AE  R + +E           +RE+  VR R  L 
Sbjct: 491 RQSFDVWEQEVTGIASPWSRADLYGAEDIRRSALESDLERQV----QREQEAVRLRDELV 546

Query: 519 EELNHRVKNVLAII 532
             ++H ++N ++II
Sbjct: 547 AVVSHDLRNPMSII 560



 Score =  100 bits (250), Expect = 3e-25
 Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 500 SELMAGERERAEVRQRM----LNEELNHRVKNVLAIIKSLVGNPSQEGKTLQEYVTALKG 555
           ++ ++ + ER ++  R+    L  ELNHRVKN LA ++++         +L+ +  +   
Sbjct: 787 AQSISSKLERQQLEDRLTRAGLLNELNHRVKNTLATVQAIASLTVNSSASLESFHKSFGA 846

Query: 556 RIQALSFAHDQIIRGEG-GGALRDLLEAELSPHRSPETTVKLEGPQITLDSRAFSVMALV 614
           R+ ALS AHD + R E     L DL+E +L    S    +  EG  +TL+ R    +++V
Sbjct: 847 RLFALSQAHDALARAEWISTELVDLIE-QLQEQDSGAHRISFEGDPVTLEPRFSLTLSMV 905

Query: 615 LHELATNAAKYGALSQNGGQLHVRWDVNENR---DCEISWRETLLTTLPAPSRAGFGTAL 671
           LHEL  NA ++GALS   GQ+ V   +         +I W+ET    + A +  GFG  L
Sbjct: 906 LHELMANALQHGALSSASGQVTVTSTLTAEHTPPTLKIEWKETGGPPVVATTVKGFGLRL 965

Query: 672 ISRSIPYDLGGRSTIRYLPNGLEAEILLPF 701
           I RSI  +L G++ I++   G+   +L+P+
Sbjct: 966 IRRSIERELKGQADIQFARTGIIWSMLIPW 995