Pairwise Alignments

Query, 260 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 266 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 15/212 (7%)

Query: 3   RFFAWGALTFGLLYFALPLIGM------TNFSLKMRRGEYSFDAYGKVLTDPRFQETFSY 56
           R   W  L F +L   LPL+G       +++S  +    ++   Y ++ +DPRF   F  
Sbjct: 14  RVVVW--LLFAIL--VLPLVGTFVYSIASSWSATILPAGFTVKWYVQLWSDPRFLMAFGQ 69

Query: 57  SVVMALFTIVFGVLLVVPTAYWVRLKLPGLRPYIEFITLLPLVIPAIVIVFGYIRLYNTS 116
           S+++ +  ++  V+L++P  + V    P L   +  + LLP  +P +V   G ++LY + 
Sbjct: 70  SLLVCVGALILSVVLILPLLFVVHYHFPKLDALMNILILLPFAVPPVVSSVGLLQLYGSG 129

Query: 117 SWLPLTGTTFGTNLLLMFGYATLALPYMYRAVDTGLRTIDVSTLTEAAQSLGAGWTTILS 176
               +     GT  +L+  Y T+ALP+MYRA+   L+ I++  L +A+Q LGA       
Sbjct: 130 PMAMV-----GTPWILIGCYFTVALPFMYRAITNNLQAINLRDLMDASQLLGASTWQAAI 184

Query: 177 RIILPNVLVAVLSGAFLTFAIVIGEFTMAALL 208
            ++LPN+   ++    L+F+ + GEF  A +L
Sbjct: 185 LVVLPNLRKGLMVALLLSFSFLFGEFVFANIL 216