Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 334 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  125 bits (314), Expect = 2e-33
 Identities = 97/351 (27%), Positives = 152/351 (43%), Gaps = 31/351 (8%)

Query: 7   RLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYP- 65
           R L+ T A V+   A + A+ +   I              P DW  +G  + A  A    
Sbjct: 2   RALSKTLAAVLLCGAASLAQAADTAIC----------YNCPPDWADWGTQLQAIAASTGV 51

Query: 66  EITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWA 125
           ++ ++  N     A  V         K     DVV  G+ FG Q +   ++  YK   W 
Sbjct: 52  QVPLDNKNSGQSLAQLVA-------EKAAPVADVVYYGVTFGLQAQKAEVVDTYKPKAWD 104

Query: 126 EIPDNVKDADGYWYGDYYGVMSMFVNKDLVKN--VPKDWADLLKPEYSGQVALAGDPRAS 183
           +IP  +KD  G+W+  + G + + VN D +    VP  WADLLKPEY G V    DP ++
Sbjct: 105 QIPAGLKDPAGHWFAIHSGTLGIMVNVDALGGLPVPHSWADLLKPEYKGMVGYL-DPSSA 163

Query: 184 NQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPIIVAW 243
               +  +A   + G      A    + YF  L K    +P       +  G  PI+V +
Sbjct: 164 FVGYVSAVAINRAMGGDLDNFA--PAIDYFQKLAKNTPIVPKQTAYARVLSGELPILVDY 221

Query: 244 DYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLG 303
           D+NA  ++    D      V+PE+G ++  YV  + A APH   A+  ++ + SD+GQ  
Sbjct: 222 DFNA--YRARYKDKANVAFVIPEEGSISVPYVMSLVANAPHRANAQKVLDFVLSDEGQAL 279

Query: 304 WLKGYCHPIRFNAMVKAGKVPQELIDSLPPAAAYEKAIFPTLEEVDANKAA 354
           W K Y  P+R        K+P ++     P + Y +A     E++ A + A
Sbjct: 280 WAKAYLRPVR------PMKMPADVAAQFLPDSDYARAGVVDYEKMAAVQEA 324