Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 354 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  182 bits (462), Expect = 1e-50
 Identities = 120/327 (36%), Positives = 175/327 (53%), Gaps = 16/327 (4%)

Query: 13  TALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEITVNEL 72
           +A+ + +TA+AA+     L  AA+KEG + +V +P  W  +        +KY    +   
Sbjct: 12  SAIALCTTAMAASTDLKALEDAARKEGTVNSVGMPDAWANWKGTWEDLASKYG---LKHS 68

Query: 73  NPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIPDNVK 132
           + D  SA E+   +A KDN    + D+ DVG AFGP    +G+ QPYK STW ++P+  K
Sbjct: 69  DTDMSSAQELAKFEAEKDNA---SADIGDVGAAFGPIAVTKGVSQPYKPSTWDQVPEWAK 125

Query: 133 DADGYWYGDYYGVMSMFVNKDLVKNV--PKDWADLLKPEYSGQVALAGDPRASNQAILGV 190
           D DG+W   Y G ++  +NKDLVK    PK W DL K +Y  +VA+ GD   + QA  GV
Sbjct: 126 DKDGHWALAYTGTIAFIINKDLVKEEERPKTWHDLEKGKY--KVAI-GDVGTAAQAANGV 182

Query: 191 LAAGLSTGAKSGKEAGEA-GLKYFADLNKAGNFLPVIGKAGTLAQGATPIIVAWDYNALS 249
           LAA +   A  G E+  A GL+ F  L +            TL +G   + V WD+N LS
Sbjct: 183 LAAAI---AYKGDESNVAPGLQLFTKLAQQKRLSLANPTIQTLEKGEVEVGVVWDFNGLS 239

Query: 250 WKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGWLKGYC 309
           +++ + D    EV++P  G +   Y   I+ YA HPNAAKL  E+++SD GQ+   KG+ 
Sbjct: 240 YREQI-DPKRFEVLIPSDGSVISGYTTVINKYAKHPNAAKLTREYIFSDAGQINLAKGHA 298

Query: 310 HPIRFNAMVKAGKVPQELIDSLPPAAA 336
            PIR   +     V  +L+ +   AAA
Sbjct: 299 RPIRAEHLKLPADVQAKLLPNDQYAAA 325