Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 350 a.a., extracellular solute-binding protein from Dickeya dadantii 3937

 Score =  188 bits (477), Expect = 2e-52
 Identities = 120/345 (34%), Positives = 177/345 (51%), Gaps = 22/345 (6%)

Query: 6   RRLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYP 65
           ++LL++        +  A A+  A L  AA+ EG + +V +P  W  + D      AKY 
Sbjct: 2   KKLLSSVLISSALFSTAAMAQDLAALEKAARAEGEVNSVGMPDSWANWKDTWDDLSAKYG 61

Query: 66  EITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWA 125
              +   + D  SA E+    A K+N    + D+ DVG+AFGP    +G+ QPYK +TW 
Sbjct: 62  ---LKHSDTDMSSAQEIAKFAAEKENA---SADIGDVGVAFGPVAVQKGVSQPYKPTTWE 115

Query: 126 EIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPKDWADLLKPEYSGQVALAGDPRASNQ 185
           ++PD  KD DG+W   Y G ++  V+K  VK +P  WADL K  Y   V   GD   ++Q
Sbjct: 116 QVPDWAKDKDGHWAMAYTGTIAFIVDKQQVKEIPHSWADLQKGNY---VVTIGDVGTASQ 172

Query: 186 AILGVLAAGLSTGAKSGKEAG-EAGLKYFADLNKAGNFLPVIGKAGTLAQGATPIIVAWD 244
           A  GVLAA  + G   G E   +  L +FA L K G           + +G   + V WD
Sbjct: 173 ASSGVLAASFALG---GNEKNLKPALDFFAKLAKEGRLGLTNPAIANIEKGEVQVGVVWD 229

Query: 245 YNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGW 304
           +N L+++  +N +   EV++P  G +   Y   I+ YA HPNAAKL  E+++SD GQ+  
Sbjct: 230 FNGLNYRDKINKD-RFEVLIPSDGSVISGYTTIINKYARHPNAAKLAREYIFSDAGQINL 288

Query: 305 LKGYCHPIRFNAM-----VKAGKVPQELIDSLPP---AAAYEKAI 341
            +GY  PIR   +     VKA  +PQE   +  P   A A++K +
Sbjct: 289 ARGYARPIRAQHITLPDDVKAKLLPQEQYKNAHPIADAEAWDKTV 333