Pairwise Alignments

Query, 504 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 450 a.a., putrescine permease from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 88/373 (23%), Positives = 162/373 (43%), Gaps = 44/373 (11%)

Query: 50  FGFSTGGWGGMLVAGIIIAIMYLGLT-FSIAEMSPALPHTGAAYSFARTAMGPWGGFVTG 108
           FG  +G   G + +  I+A+  +  T  S   +    P +G+AY++ + A+ P  GF+ G
Sbjct: 39  FGIVSGITAGHVPSAYILALAGILFTAVSYGTLVKRFPQSGSAYTYTQRAINPHVGFLVG 98

Query: 109 LCENVEYVLTPAVVVTFITAYVNSILGLDPAYSPFVWIV-FYAIFLALNVFGLELSFKVT 167
               ++Y+L P V       Y++++    P    ++W+  F  +   +N+  + L     
Sbjct: 99  WSSLLDYLLLPMVNALLAKLYLSAMF---PEVPEWMWVAGFVTLISLINMRSVNLVAHFN 155

Query: 168 LVITLISLAVLVFFWISAIPNIDFSRFALNIGVGPDGKAVELPEGGGSFFPFGFSGVLAT 227
           L+   + +A++  F    +  +D        G+G     +   +         FS + A 
Sbjct: 156 LLFVGVQVAIIAVFIYLCVRGLDQGE-----GLGTTWSLIPFADSQTQ-----FSALAAG 205

Query: 228 LPFAVWLFLAIEQLPLAAEESVDPKRDMPKGIIL-----GMVTLMVSAFMIVLLNPSLPG 282
                + FL  + +   +EE+ DP + +P+ I L     G+V + VS F    +    P 
Sbjct: 206 ATILCFSFLGFDAVTCLSEETRDPAKTIPRAIFLTALIGGVVFITVSYF----IQAYFPT 261

Query: 283 VGAFHLSSSLEPLLDGFKAIYGDGGVVLLGLVALT--GLIASFHTILYAQGRQIYSLSRA 340
           +  FH   +  P +    A+Y  G +     +A T    IAS      +  R +Y + R 
Sbjct: 262 MARFHDQEAALPEI----ALYVGGKLFQSIFIACTVINTIASGLASQTSVSRLLYVMGRD 317

Query: 341 GYFP-TVLSITHSKYRTPYVANITGAIVGLAVMLVIWFSLGAEQGGSIIGSVLLNMAVFG 399
              P +V +  HS+Y+TP V NI  A+VGL  +  I+F L       +  + ++N   FG
Sbjct: 318 NVIPASVFARLHSRYKTP-VLNI--AVVGLISLSAIFFDL-------VTATSIIN---FG 364

Query: 400 AMFSYIMQAISFI 412
           A+ ++    +S I
Sbjct: 365 ALVAFSFVNLSVI 377