Pairwise Alignments

Query, 504 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 472 a.a., Uncharacterized amino acid permease YtnA from Pseudomonas putida KT2440

 Score = 87.8 bits (216), Expect = 8e-22
 Identities = 106/468 (22%), Positives = 202/468 (43%), Gaps = 44/468 (9%)

Query: 23  LSRYAGVWSLWALGVGAVIS-GHFSGWNFGFSTGGWGGMLVAGIIIAIMYLGLTFSIAEM 81
           L R  G   +  + +GA I  G F G        G   ++++ II  +  L +  ++ EM
Sbjct: 18  LKRELGERHIRLMALGACIGVGLFLGSAKAIEMAG-PAIMLSYIIGGLAILVIMRALGEM 76

Query: 82  SPALPHTGAAYSFARTAMGPWGGFVTGLCENVEYVLTPAVVVTFITAYVNSILGLDPAYS 141
           +   P  G+   +A+  +GP  GF+TG      +++T    +T +  Y+       P   
Sbjct: 77  AVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAIYMGIWF---PDVP 133

Query: 142 PFVW-IVFYAIFLALNVFGLELSFKVTLVITLISLAVLVFFWISAIPNIDFSRFALNIGV 200
            ++W +       A+N+  ++   +      LI +  ++   +  I  I F       G 
Sbjct: 134 RWIWALAALGSMGAVNLVAVKAFGEFEFWFALIKIVTIIAMVLGGIGIIAF-------GF 186

Query: 201 GPDGKAVELPE--GGGSFFPFGFSGVLATLPFAVWLFLAIEQLPLAAEESVDPKRDMPKG 258
           G DG AV +      G F P G +GVL +L   ++ +L +E + L A E+ +P++ +P+ 
Sbjct: 187 GNDGVAVGISNLWSNGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEARNPQKTIPQA 246

Query: 259 IILGMVTLMVSAFMIVLLNPSLPGVGAFHLSSSLEPLLDGFKAIYGDGGVVLLGLVALTG 318
           I  G V   +  F +  L   L       + S   P +  F+ +       ++  V +T 
Sbjct: 247 I--GSVFWRILLFYVGALFVILSIYPWNEIGSQGSPFVMTFERLGIKTAAGIINFVVITA 304

Query: 319 LIASFHTILYAQGRQIYSLSRAGYFPTVLSITHSKYRTPYVANITGAIVGLAVMLVIWFS 378
            ++S +  +++ GR +YSL++ G  P   + T SK   P  A +    +G  ++ V+   
Sbjct: 305 ALSSCNGGIFSTGRMLYSLAQNGQAPAAFART-SKNGVPRNALLLS--IGALLLGVLANY 361

Query: 379 LGAEQGGSIIGSVLLNMAVFGAMFSYIMQAISFILLRKNLPNIER----------PFRSP 428
           L  E+    +   + ++A FGA+++++M  ++ +  R  L   ER          P  S 
Sbjct: 362 LVPEK----VFVWVTSIATFGAIWTWVMILLAQLKFRAGLTTAERKALKYRMWLWPLSSY 417

Query: 429 FGIPGALLTIIIAIVTLLYQIQDPNFTKGVLWVAVWFAV--AIAYFAF 474
                  L  ++ +V L+   +D   T+  L++   F V   + Y+ F
Sbjct: 418 LA-----LAFLVLVVGLMAYFED---TRVALYIGPAFLVLLTVLYYTF 457