Pairwise Alignments

Query, 504 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 469 a.a., Gamma-aminobutyrate permease and related permeases from Enterobacter asburiae PDN3

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 101/458 (22%), Positives = 198/458 (43%), Gaps = 31/458 (6%)

Query: 32  LWALGVGAVISGHFSGWNFGFSTGGWGGMLVAGIIIAIMYLGLTFSIAEMSPALPHTGAA 91
           L A+G GA+ +G F G     S  G   ++   +II  M   +  ++ E+  +     + 
Sbjct: 30  LIAIG-GAIGTGLFMGSGKTISLAG-PSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSF 87

Query: 92  YSFARTAMGPWGGFVTGLCENVEYVLTPAVVVTFITAYVNSILGLDPAYSPFVW-IVFYA 150
             FA   +GPW G+ TG      +V+T    V  ITAY        P  S +V  +    
Sbjct: 88  SDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAYAQFWF---PGLSDWVASLAVIV 144

Query: 151 IFLALNVFGLELSFKVTLVITLISLAVLVFFWISAIPNIDFSRFALNIGVGPDGKAVELP 210
           + L+LN+  +++  ++     +I +  +V   +  +  +  + F    GV        L 
Sbjct: 145 LLLSLNLATVKMFGEMEFWFAMIKIVAIVGLIVVGLVMV-LTHFQSPTGV--QASFTHLW 201

Query: 211 EGGGSFFPFGFSGVLATLPFAVWLFLAIEQLPLAAEESVDPKRDMPKGI-ILGMVTLMVS 269
             GG +FP G SG  A    AV+ F+ IE +   A E+ DP++ +P+ I  + +  +M  
Sbjct: 202 NDGG-WFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPLRIIMFY 260

Query: 270 AFMIVLLNPSLPGVGAFHLSSSLEPLLDGFKAIYGDGGVVLLGLVALTGLIASFHTILYA 329
            F ++++    P        S   P ++ F  +       L+  V LT   +S ++ +++
Sbjct: 261 VFALIIIMSVTPWSSVVPTKS---PFVELFVLVGLPAAASLINFVVLTSAASSANSGVFS 317

Query: 330 QGRQIYSLSRAGYFPTVLSITHSKYRTPYVANITGA---IVGLAVMLVIWFSLGAEQGGS 386
             R ++ L++ G  P+  +   SK   P    +T +   ++G  VML +          S
Sbjct: 318 TSRMLFGLAQEGVAPSAFA-KLSKRAVP-AKGLTFSCMCLLGGVVMLYV--------NPS 367

Query: 387 IIGSVLLNMAVFGAMFSYIMQAI--SFILLRKNLPNIERP--FRSPFGIPGALLTIIIAI 442
           +IG+  +   V   +F ++   I  S+++ RK  P++     ++ P G     + +   +
Sbjct: 368 VIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFV 427

Query: 443 VTLLYQIQDPNFTKGVLWVAVWFAVAIAYFAFVGRHRL 480
             L+    + +  + ++   +WF      + F+G+ R+
Sbjct: 428 FVLVLLTLEDDTRQALIVTPLWFIALGLGWVFIGKKRM 465