Pairwise Alignments

Query, 408 a.a., lytic murein transglycosylase from Agrobacterium fabrum C58

Subject, 348 a.a., membrane-bound lytic murein transglycosylase B from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 1e-28
 Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 12/245 (4%)

Query: 100 VSQARLDIGRKKLQELSSTFARAENEFGVPAGVIAAFWAMETDFGAVQGDFNTRNALVTL 159
           ++ AR+  G    ++  +  ARAE E+GVPA  I A   +ET FG   G++   +AL TL
Sbjct: 103 ITDARIARGVDFWRQHEAVLARAEQEYGVPAQYIVAIIGVETFFGRNTGNYRVIDALSTL 162

Query: 160 SHDCR-RPELFRPQLLALIEMVQHGDLDPATNTGAWAGEIGQVQMLPKDIIAFGVDGDGN 218
             D   R E FR +L   + + +   LDP T  G++AG +G  Q +P     + VD DG+
Sbjct: 163 GFDYPPRAEFFRKELREFLLLAREEQLDPLTLKGSYAGAMGLPQFMPSSFRNYAVDFDGD 222

Query: 219 GHINVKDSAPDAILTAAKFIQHLGFKKGE-----PWMQEVSVPENLPWEKSGLGGSLTAG 273
           GHIN+ ++  DAI + A + +  G+  GE      W++     E L    +G+    T G
Sbjct: 223 GHINIWNNPDDAIGSVASYFKRHGWVAGEGVVSRAWVEGERADEGL---TTGIEPVKTVG 279

Query: 274 DWFALGVTPRDGNKNFASLPAALIMPQGRKGPTF-ITYPNFNIYLEWNQSFIYTTSAAYF 332
           +   LG +  D  ++   LP      +G  GP + +   NF     +N+S +Y  +    
Sbjct: 280 ELRTLGWSVHDSLRD--DLPVTAFRLEGESGPEYWMGLKNFYAITRYNRSVMYAMAVHQL 337

Query: 333 ANRLM 337
           A +L+
Sbjct: 338 AEQLV 342